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B_1_S1_Biohub_coassembly_k141_2948206

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_2948206_1
RBG_19FT_COMBO_Deltaproteobacteria_56_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(138..890)
DNA (753bp) protein (251aa)
Uncharacterized protein bin=GWB2_Proteobacteria_55_19 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
XRE family transcriptional regulator
Tax=RBG_19FT_COMBO_Deltaproteobacteria_56_10_curated
B_1_S1_Biohub_coassembly_k141_2948206_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(893..1630)
DNA (738bp) protein (246aa)
Protein serine/threonine phosphatase Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SCH4_GALCS
protein serine/threonine phosphatase
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
B_1_S1_Biohub_coassembly_k141_2948206_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1630..3678)
DNA (2049bp) protein (683aa)
ABC-type Na+ efflux pump, permease component Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLQ7_SINAD
Na+ efflux pump ABC transporter permease
ABC-type Na+ efflux pump, permease component {ECO:0000313|EMBL:AGA30182.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_2948206_4

Not on your lists

comp(3675..4433)
DNA (759bp) protein (253aa)
ABC transporter related Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTM6_OPITP
Marine sediment metagenome DNA, contig: S01H4_C00009 {ECO:0000313|EMBL:GAG61001.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter-like protein
B_1_S1_Biohub_coassembly_k141_2948206_5
unknown

Not on your lists

comp(4490..5596)
DNA (1107bp) protein (369aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2948206_6
unknown

Not on your lists

5732..5992
DNA (261bp) protein (87aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2948206_7
unknown

Not on your lists

7597..8007
DNA (411bp) protein (137aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2948206_8
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8149..9174)
DNA (1026bp) protein (342aa)
membrane protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
B_1_S1_Biohub_coassembly_k141_2948206_9
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9278..9853)
DNA (576bp) protein (192aa)
PBS lyase HEAT domain protein repeat-containing protein Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R8R6_PIRSD
PBS lyase HEAT domain-containing protein
Tax=RBG_16_Planctomycetes_64_12_curated
B_1_S1_Biohub_coassembly_k141_2948206_10
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(9825..10805)
DNA (981bp) protein (327aa)
N-acetylmuramoyl-L-alanine amidase Tax=Centipeda periodontii DSM 2778 RepID=F5RPZ9_9FIRM
N-acetylmuramoyl-L-alanine amidase
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_2948206_11
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

10935..11804
DNA (870bp) protein (290aa)
Thiamine-monophosphate kinase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJD8_SINAD
thiamine-monophosphate kinase
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_2948206_12
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

11801..12244
DNA (444bp) protein (148aa)
ATPase Tax=Desmospora sp. 8437 RepID=F5SIQ1_9BACL
hypothetical protein
Uncharacterized protein family UPF0079, ATPase {ECO:0000313|EMBL:AEH45691.1}; Flags: Precursor;; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
B_1_S1_Biohub_coassembly_k141_2948206_13
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

12344..13024
DNA (681bp) protein (227aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LVM8_HALO1
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_2948206_14
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13021..14451
DNA (1431bp) protein (477aa)
Uncharacterized protein Tax=Rhodopirellula baltica SH28 RepID=K5DG32_RHOBT
hypothetical protein
Tax=RBG_16_Planctomycetes_64_10_curated
B_1_S1_Biohub_coassembly_k141_2948206_15
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

14556..15029
DNA (474bp) protein (158aa)
DoxX family protein bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
DoxX family protein
Tax=GWA1_Bdellovibrionales_52_35_curated
B_1_S1_Biohub_coassembly_k141_2948206_16
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15357..16475
DNA (1119bp) protein (373aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3X6_9FIRM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
B_1_S1_Biohub_coassembly_k141_2948206_17
unknown

Not on your lists

16490..16771
DNA (282bp) protein (94aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2948206_18
Drosophila virilis, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

16830..17828
DNA (999bp) protein (333aa)
GJ16603 Tax=Drosophila virilis RepID=B4M6N7_DROVI
GJ16603 {ECO:0000313|EMBL:EDW62454.1}; species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila.;" source="Drosophila virilis (Fruit fly).;"
B_1_S1_Biohub_coassembly_k141_2948206_19
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

Not on your lists

17825..20356
DNA (2532bp) protein (844aa)
Uncharacterized protein Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BYV7_ANAMD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
B_1_S1_Biohub_coassembly_k141_2948206_20
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(20542..22920)
DNA (2379bp) protein (793aa)
Peptidase S45, penicillin amidase Tax=Roseiflexus sp. (strain RS-1) RepID=A5USU8_ROSS1
peptidase S45, penicillin amidase
Tax=RBG_13_Chloroflexi_68_17_curated
B_1_S1_Biohub_coassembly_k141_2948206_21
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(22941..25724)
DNA (2784bp) protein (928aa)
WD40-like beta Propeller containing protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XQ58_9BACT
surface antigen (D15)
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
B_1_S1_Biohub_coassembly_k141_2948206_22
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(25738..26904)
DNA (1167bp) protein (389aa)
Monogalactosyldiacylglycerol synthase bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_2948206_23
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27033..27458
DNA (426bp) protein (142aa)
ATPase Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003670BA5
Putative uncharacterized protein {ECO:0000313|EMBL:EHR05735.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
ATPase
B_1_S1_Biohub_coassembly_k141_2948206_24
RBG_16_Planctomycetes_41_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(27509..28153)
DNA (645bp) protein (215aa)
NAD(P)H-hydrate epimerase Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4I3_9BACT
carbohydrate kinase
Tax=RBG_16_Planctomycetes_41_13_curated
B_1_S1_Biohub_coassembly_k141_2948206_25
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(28229..31744)
DNA (3516bp) protein (1172aa)
DNA polymerase III, alpha subunit Tax=Thermincola potens (strain JR) RepID=D5XA39_THEPJ
DNA polymerase III subunit alpha
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_2948206_26
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31864..32892)
DNA (1029bp) protein (343aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
RNA-directed DNA polymerase {ECO:0000313|EMBL:CAN92832.1}; EC=2.7.7.49 {ECO:0000313|EMBL:CAN92832.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
hypothetical protein Tax=WS1 bacterium JGI 0000059-K21 RepID=UPI00036276E7
B_1_S1_Biohub_coassembly_k141_2948206_27
unknown

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comp(33227..33928)
DNA (702bp) protein (234aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2948206_28
unknown

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comp(34025..34288)
DNA (264bp) protein (88aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_2948206_29
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34514..35926)
DNA (1413bp) protein (471aa)
Alpha-2-macroglobulin domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Z77_SOLUE
alpha-2-macroglobulin domain-containing protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
B_1_S1_Biohub_coassembly_k141_2948206_30
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35960..40342)
DNA (4383bp) protein (1461aa)
Hypothetical membrane protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYG6_ANATU
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
Displaying items 1-30 of 34 in total

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