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B_1_S1_Biohub_coassembly_k141_3635148

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_3635148_1
unknown

Not on your lists

comp(1..120)
DNA (120bp) protein (40aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3635148_2
unknown

Not on your lists

353..970
DNA (618bp) protein (206aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3635148_3
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

975..1277
DNA (303bp) protein (101aa)
ArsR family transcriptional regulator Tax=Melioribacter roseus (strain P3M) RepID=I7A2S5_MELRP
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AFN74231.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
B_1_S1_Biohub_coassembly_k141_3635148_4
unknown

Not on your lists

1274..2134
DNA (861bp) protein (287aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3635148_5
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2140..3387)
DNA (1248bp) protein (416aa)
cellulase (EC:3.2.1.4)
Cellulase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F517_CONWI
Tax=RBG_16_Chloroflexi_57_11_curated
B_1_S1_Biohub_coassembly_k141_3635148_6
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(3477..4079)
DNA (603bp) protein (201aa)
Putative uncharacterized protein bin=GWF2_Planctomycetes_42_9 species=Shewanella piezotolerans genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
B_1_S1_Biohub_coassembly_k141_3635148_7
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4261..5775
DNA (1515bp) protein (505aa)
protein kinase (EC:2.7.11.1)
Protein kinase Tax=Sorangium cellulosum (strain So ce56) RepID=A9G7V5_SORC5
Tax=CG_Delta_07
B_1_S1_Biohub_coassembly_k141_3635148_8
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5733..6608
DNA (876bp) protein (292aa)
Serine/threonine protein kinase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LK13_HALO1
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACY18520.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
B_1_S1_Biohub_coassembly_k141_3635148_9
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6714..8168
DNA (1455bp) protein (485aa)
MFS transporter Tax=Sorangium cellulosum So0157-2 RepID=S4XIN8_SORCE
MFS transporter
MFS transporter {ECO:0000313|EMBL:AGP32416.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
B_1_S1_Biohub_coassembly_k141_3635148_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

8194..9264
DNA (1071bp) protein (357aa)
Peroxiredoxin Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH08_SINAD
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AGA28103.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_3635148_11
unknown

Not on your lists

9261..11798
DNA (2538bp) protein (846aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3635148_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11943..12905
DNA (963bp) protein (321aa)
SPFH/band 7 domain protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TPN6_9DELT
NrtR-regulated hypothetical OrfX {ECO:0000313|EMBL:KFE68985.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
SPFH domain-containing protein/band 7 family protein
B_1_S1_Biohub_coassembly_k141_3635148_13
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13008..13955
DNA (948bp) protein (316aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MH96_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE07339.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
B_1_S1_Biohub_coassembly_k141_3635148_14
unknown

Not on your lists

14045..15250
DNA (1206bp) protein (402aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3635148_15
unknown

Not on your lists

15538..16302
DNA (765bp) protein (255aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3635148_16
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16406..18628
DNA (2223bp) protein (741aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U199_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC41948.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
B_1_S1_Biohub_coassembly_k141_3635148_17
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18701..20104
DNA (1404bp) protein (468aa)
O-linked GlcNAc transferase {ECO:0000313|EMBL:GAN34346.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
B_1_S1_Biohub_coassembly_k141_3635148_18
unknown

Not on your lists

comp(20129..20341)
DNA (213bp) protein (71aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3635148_19
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

Not on your lists

20551..21780
DNA (1230bp) protein (410aa)
Putative uncharacterized protein (Fragment) bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
B_1_S1_Biohub_coassembly_k141_3635148_20
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21961..22503
DNA (543bp) protein (181aa)
ECF subfamily RNA polymerase sigma-24 subunit Tax=Schlesneria paludicola RepID=UPI00029A9F65
RNA polymerase sigma-70 ECF-like, Rhodopirellula baltica {ECO:0000313|EMBL:EMI55439.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
RNA polymerase sigma-70 factor, Rhodopirellula/Verrucomicrobium family
B_1_S1_Biohub_coassembly_k141_3635148_21
unknown

Not on your lists

22500..23360
DNA (861bp) protein (287aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3635148_22
R_RIF_OD1_02_44_20, RIF-OD1-2, Parcubacteria, Bacteria

Not on your lists

23372..24607
DNA (1236bp) protein (412aa)
Alpha/beta fold family hydrolase Tax=Dehalococcoides mccartyi GY50 RepID=V5QDD5_9CHLR
dienelactone hydrolase
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_02_44_20_curated
B_1_S1_Biohub_coassembly_k141_3635148_23
unknown

Not on your lists

24675..25319
DNA (645bp) protein (215aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3635148_24
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25329..25628)
DNA (300bp) protein (100aa)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI000376229D
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
B_1_S1_Biohub_coassembly_k141_3635148_25
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(25657..26517)
DNA (861bp) protein (287aa)
Putative uncharacterized protein Tax=Bacillus licheniformis (strain DSM 13 / ATCC 14580) RepID=Q62NB3_BACLD
hypothetical protein
Tax=RBG_16_Bdellovibrionales_40_8_curated
B_1_S1_Biohub_coassembly_k141_3635148_26
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(26596..27015)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Flavobacterium saliperosum S13 RepID=V6SN96_9FLAO
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
B_1_S1_Biohub_coassembly_k141_3635148_27
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(27026..29062)
DNA (2037bp) protein (679aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI0003680535
PKD domain-containing protein
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_3635148_28
unknown

Not on your lists

comp(29074..29397)
DNA (324bp) protein (108aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_3635148_29
Paenibacillus sp. P22, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29491..34914)
DNA (5424bp) protein (1808aa)
Thermophilic serine proteinase Tax=Paenibacillus sp. P22 RepID=T2LXC8_9BACL
Uncharacterized protein {ECO:0000313|EMBL:CDN42944.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P22.;"
peptidase S8/S53 subtilisin kexin sedolisin
B_1_S1_Biohub_coassembly_k141_3635148_30
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35068..35778
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Mycobacterium tuberculosis complex RepID=R4SCU3_MYCTC
putative ARGININE AND ALANINE RICH protein
Arginine and alanine rich protein {ECO:0000313|EMBL:KBN10918.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis OFXR-28.;"
Displaying items 1-30 of 42 in total

View Taxonomy