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B_1_S1_Biohub_coassembly_k141_4309805

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4309805_1
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(49..849)
DNA (801bp) protein (267aa)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
B_1_S1_Biohub_coassembly_k141_4309805_2
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

927..2294
DNA (1368bp) protein (456aa)
RNA modification enzyme, MiaB family {ECO:0000313|EMBL:EEG78048.1}; EC=1.3.1.74 {ECO:0000313|EMBL:EEG78048.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
RNA modification enzyme, MiaB family Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEL6_9FIRM
MiaB-like tRNA modifying enzyme
B_1_S1_Biohub_coassembly_k141_4309805_3
unknown

Not on your lists

2291..2809
DNA (519bp) protein (173aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4309805_4
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2799..3554)
DNA (756bp) protein (252aa)
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
B_1_S1_Biohub_coassembly_k141_4309805_5
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

3599..4960
DNA (1362bp) protein (454aa)
Putative uncharacterized protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
arabinose efflux permease family protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
B_1_S1_Biohub_coassembly_k141_4309805_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5016..5888)
DNA (873bp) protein (291aa)
UbiA prenyltransferase Tax=Halococcus hamelinensis RepID=M0M0M7_9EURY
UbiA prenyltransferase {ECO:0000313|EMBL:EMA37930.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
UbiA prenyltransferase
B_1_S1_Biohub_coassembly_k141_4309805_7
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(5993..6274)
DNA (282bp) protein (94aa)
hypothetical protein Tax=Desulfospira joergensenii RepID=UPI0003B4F349
hypothetical protein
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_4309805_8
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6271..8103)
DNA (1833bp) protein (611aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZ35_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAJ72337.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
peptidase M50
B_1_S1_Biohub_coassembly_k141_4309805_9

Not on your lists

comp(8137..9285)
DNA (1149bp) protein (383aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCS9_SINAD
Uncharacterized protein {ECO:0000313|EMBL:KKL70060.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase
B_1_S1_Biohub_coassembly_k141_4309805_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(9409..11430)
DNA (2022bp) protein (674aa)
Putative TonB-dependent outer membrane receptor for cobalamin and Fe transport Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHA1_9BACT
TonB-dependent outer membrane receptor for cobalamin and Fe transport
Putative TonB-dependent outer membrane receptor for cobalamin and Fe transport {ECO:0000313|EMBL:CBE69133.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
B_1_S1_Biohub_coassembly_k141_4309805_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11801..12385)
DNA (585bp) protein (195aa)
hypothetical protein VspiD_21265 bin=GWD2_Deltaproteobacteria_55_8 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Fatty acid hydroxylase superfamily
Tax=GWD2_Deltaproteobacteria_55_8_curated
B_1_S1_Biohub_coassembly_k141_4309805_12
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(12492..14162)
DNA (1671bp) protein (557aa)
Adenylate/guanylate cyclase with GAF sensor and FHA domain Tax=Pseudanabaena sp. PCC 7367 RepID=K9SJV5_9CYAN
GAF sensor-containing adenylate/guanylate cyclase
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
B_1_S1_Biohub_coassembly_k141_4309805_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14270..15241)
DNA (972bp) protein (324aa)
phosphoesterase PA-phosphatase-like protein bin=bin3_NC10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
phosphoesterase PA-phosphatase-like protein
Tax=CSP1_5_NC10
B_1_S1_Biohub_coassembly_k141_4309805_14
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15259..16164)
DNA (906bp) protein (302aa)
putative formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LHA9_9BACT
Tax=RBG_16_Euryarchaeota_68_13_curated
B_1_S1_Biohub_coassembly_k141_4309805_15
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

16248..17408
DNA (1161bp) protein (387aa)
L-lysine dehydrogenase bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
saccharopine dehydrogenase family protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
B_1_S1_Biohub_coassembly_k141_4309805_trna_1
unknown

Not on your lists

comp(17649..17719)
DNA (71bp)
transferRNA Gln
B_1_S1_Biohub_coassembly_k141_4309805_16
unknown

Not on your lists

comp(17772..19448)
DNA (1677bp) protein (559aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4309805_17
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19481..20701)
DNA (1221bp) protein (407aa)
gyrA suspected. See adjacent gene [B_1_S1_Biohub_coassembly_k141_4309805_18].
DNA gyrase subunit alpha (EC:5.99.1.3)
DNA gyrase, A subunit Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SNH9_PLAL2
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
B_1_S1_Biohub_coassembly_k141_4309805_18
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists


comp(20738..22192)
DNA (1455bp) protein (485aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A Tax=planctomycete KSU-1 RepID=I3IHN2_9PLAN
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_4309805_19
unknown

Not on your lists

comp(22382..23080)
DNA (699bp) protein (233aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4309805_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23077..24399)
DNA (1323bp) protein (441aa)
Aminotransferase, class I Tax=Plesiocystis pacifica SIR-1 RepID=A6GDH1_9DELT
Aspartate aminotransferase {ECO:0000313|EMBL:AKF11506.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
class I aminotransferase
B_1_S1_Biohub_coassembly_k141_4309805_21
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

24652..25413
DNA (762bp) protein (254aa)
Enoyl-CoA hydratase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
enoyl-CoA hydratase
Tax=GWC2_Rokubacteria_70_16_curated
B_1_S1_Biohub_coassembly_k141_4309805_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(25394..25831)
DNA (438bp) protein (146aa)
Endoribonuclease L-PSP Tax=Gloeobacter kilaueensis JS1 RepID=U5QNE8_9CYAN
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
B_1_S1_Biohub_coassembly_k141_4309805_23
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(25864..28443)
DNA (2580bp) protein (860aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IMC1_9PLAN
hypothetical protein
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_4309805_24
unknown

Not on your lists

28657..29013
DNA (357bp) protein (119aa)

This feature has no annotations

Displaying 25 items

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