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B_1_S1_Biohub_coassembly_k141_4858141

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4858141_1
unknown

Not on your lists

comp(2..340)
DNA (339bp) protein (113aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_2
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(363..803)
DNA (441bp) protein (147aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
twitching motility protein PilT Tax=Prochlorothrix hollandica RepID=UPI000348D289
PilT protein domain-containing protein
B_1_S1_Biohub_coassembly_k141_4858141_3
unknown

Not on your lists

comp(767..1105)
DNA (339bp) protein (113aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_4
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

comp(1092..2144)
DNA (1053bp) protein (351aa)
DNA protecting protein DprA Tax=Singulisphaera acidiphila RepID=L0DP84_SINAD
DNA protecting protein DprA
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
B_1_S1_Biohub_coassembly_k141_4858141_5
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2285..3406)
DNA (1122bp) protein (374aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase Tax=Synechococcus sp. CB0101 RepID=UPI0002001979
Tax=GWF2_Verrucomicrobia_62_7_curated
B_1_S1_Biohub_coassembly_k141_4858141_6
unknown

Not on your lists

comp(3416..3892)
DNA (477bp) protein (159aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4373..4696
DNA (324bp) protein (108aa)
ATP-dependent Clp protease adaptor protein ClpS Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029R9_SOLUE
ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adaptor protein ClpS {ECO:0000313|EMBL:ABJ82207.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
B_1_S1_Biohub_coassembly_k141_4858141_8
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(4744..5427)
DNA (684bp) protein (228aa)
Uracil-DNA glycosylase superfamily Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U9L6_OCEP5
uracil-DNA glycosylase superfamily
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ADR37180.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
B_1_S1_Biohub_coassembly_k141_4858141_9
unknown

Not on your lists

comp(5414..7306)
DNA (1893bp) protein (631aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_10
unknown

Not on your lists

comp(7375..9261)
DNA (1887bp) protein (629aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

9411..10028
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4C0_GEMAT bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Carboxymuconolactone decarboxylase
Tax=RBG_16_RIF_WS3X_71_46_curated
B_1_S1_Biohub_coassembly_k141_4858141_12
CG_Omnitr_05, Omnitrophica, Bacteria

Not on your lists

10041..10418
DNA (378bp) protein (126aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WL44_GEOS8
hypothetical protein
Tax=CG_Omnitr_05
B_1_S1_Biohub_coassembly_k141_4858141_13
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10576..13197
DNA (2622bp) protein (874aa)
Tetratricopeptide repeat protein Tax=Oscillatoria acuminata PCC 6304 RepID=K9TB41_9CYAN
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AFY80112.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
B_1_S1_Biohub_coassembly_k141_4858141_14
unknown

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13402..13983
DNA (582bp) protein (194aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14033..16432
DNA (2400bp) protein (800aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
B_1_S1_Biohub_coassembly_k141_4858141_16
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16481..17338
DNA (858bp) protein (286aa)
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHX4_ANASK
Tax=RBG_13_Deltaproteobacteria_65_10_curated
B_1_S1_Biohub_coassembly_k141_4858141_17
unknown

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comp(17473..18108)
DNA (636bp) protein (212aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_18
unknown

Not on your lists

18382..19560
DNA (1179bp) protein (393aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_19
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(19894..21171)
DNA (1278bp) protein (426aa)
WD-40 repeat protein bin=GWC2_Methylomirabilis_70_16 species=Arthrospira maxima genus=Arthrospira taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
WD40 repeat-containing protein
Tax=GWC2_Rokubacteria_70_16_curated
B_1_S1_Biohub_coassembly_k141_4858141_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21377..24223)
DNA (2847bp) protein (949aa)
serine/threonine protein kinase Tax=Gemmata obscuriglobus RepID=UPI00016C58EC
WD40 repeat-containing protein
WD40 repeat-containing protein {ECO:0000313|EMBL:AGA31435.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_4858141_21
unknown

Not on your lists

comp(24261..24689)
DNA (429bp) protein (143aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_22
unknown

Not on your lists

comp(24686..24970)
DNA (285bp) protein (95aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_23
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25055..25936
DNA (882bp) protein (294aa)
tRNA delta(2)-isopentenylpyrophosphate transferase (EC:4.2.99.20)
tRNA isopentenyltransferase Tax=Gemmata obscuriglobus RepID=UPI00016C5078
Tax=RBG_16_Planctomycetes_64_10_curated
B_1_S1_Biohub_coassembly_k141_4858141_24
unknown

Not on your lists

26314..27411
DNA (1098bp) protein (366aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4858141_25
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27423..28532
DNA (1110bp) protein (370aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF22951.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
B_1_S1_Biohub_coassembly_k141_4858141_26
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28579..29688
DNA (1110bp) protein (370aa)
Glycosyl hydrolase, family 10 Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q482C3_COLP3
glycosyl hydrolase
Glycosyl hydrolase, family 10 {ECO:0000313|EMBL:AAZ26213.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (strain 34H / ATCC BAA-681) (Vibrio; psychroerythus).;"
B_1_S1_Biohub_coassembly_k141_4858141_27
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29876..30649)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8Z4Z7_XANCT
Uncharacterized protein {ECO:0000313|EMBL:EKU25995.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens pv. graminis ART-Xtg29.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4858141_28
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

30861..34103
DNA (3243bp) protein (1081aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Nitrolancetus hollandicus Lb RepID=I4EGN7_9CHLR
RNA polymerase sigma-H factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
B_1_S1_Biohub_coassembly_k141_4858141_29
Selenomonas sp. CM52, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


34210..36291
DNA (2082bp) protein (694aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. CM52.;"
Histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase Tax=Selenomonas sp. CM52 RepID=J4X1Y1_9FIRM
B_1_S1_Biohub_coassembly_k141_4858141_30
unknown

Not on your lists

36308..36622
DNA (315bp) protein (105aa)

This feature has no annotations

Displaying items 1-30 of 62 in total

View Taxonomy