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B_1_S1_Biohub_coassembly_k141_5247707

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5247707_1
unknown

Not on your lists

2..97
DNA (96bp) protein (32aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5247707_2
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

219..1535
DNA (1317bp) protein (439aa)
homoserine dehydrogenase ThrA (EC:1.1.1.3)
Homoserine dehydrogenase bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
B_1_S1_Biohub_coassembly_k141_5247707_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

1532..2512
DNA (981bp) protein (327aa)
homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39] bin=RBG_19FT_COMBO_GAL15_69_19 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
thrB; homoserine kinase ThrB (EC:2.7.1.39)
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
B_1_S1_Biohub_coassembly_k141_5247707_4
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

2526..3755
DNA (1230bp) protein (410aa)
threonine synthase Tax=Nodosilinea nodulosa RepID=UPI00030B26AB
threonine synthase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
B_1_S1_Biohub_coassembly_k141_5247707_5
Astyanax mexicanus, Astyanax, Characiformes, Neopterygii, Chordata, Metazoa

Not on your lists

comp(3834..4907)
DNA (1074bp) protein (358aa)
MMPL2 Tax=Branchiostoma belcheri tsingtauense RepID=I1TE96_BRABE
Uncharacterized protein {ECO:0000313|Ensembl:ENSAMXP00000006591}; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Characidae incertae sedis; Astyanax clade; Astyanax.;" source="Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).;"
conserved exported protein of unknown function
B_1_S1_Biohub_coassembly_k141_5247707_6
unknown

Not on your lists

comp(4904..5482)
DNA (579bp) protein (193aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5247707_7
unknown

Not on your lists

comp(5607..6092)
DNA (486bp) protein (162aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5247707_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6103..6432)
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8T8_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25652.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
B_1_S1_Biohub_coassembly_k141_5247707_9
unknown

Not on your lists

comp(6433..6555)
DNA (123bp) protein (41aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5247707_10
unknown

Not on your lists

comp(6571..6786)
DNA (216bp) protein (72aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5247707_11
GWA2_Gallionellales_55_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6811..8034)
DNA (1224bp) protein (408aa)
hypothetical protein
Putative uncharacterized protein bin=GWA2_Elusi_like_61_42 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
Tax=GWA2_Gallionellales_55_18_curated
B_1_S1_Biohub_coassembly_k141_5247707_12
unknown

Not on your lists

comp(8062..8454)
DNA (393bp) protein (131aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5247707_13
unknown

Not on your lists

comp(8455..8832)
DNA (378bp) protein (126aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5247707_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9100..10101)
DNA (1002bp) protein (334aa)
CoB--CoM heterodisulfide reductase bin=GWC2_CP_Nitrospirae-rel_42_7 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
B_1_S1_Biohub_coassembly_k141_5247707_15
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10200..11825)
DNA (1626bp) protein (542aa)
FAD binding domain protein bin=GWA2_Elusi_like_61_42 species=Coleofasciculus chthonoplastes genus=Coleofasciculus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
Tax=GWA2_Rhodocyclales_65_20_curated
B_1_S1_Biohub_coassembly_k141_5247707_16
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

11941..18276
DNA (6336bp) protein (2112aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI00029B1E45
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
B_1_S1_Biohub_coassembly_k141_5247707_17
unknown

Not on your lists

comp(19139..19930)
DNA (792bp) protein (264aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5247707_18
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20035..22944)
DNA (2910bp) protein (970aa)
Serine/threonine protein kinase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LK13_HALO1
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACY18520.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
B_1_S1_Biohub_coassembly_k141_5247707_19
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(23105..23872)
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XY03_SORCE
hypothetical protein
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_5247707_20
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24069..25508
DNA (1440bp) protein (480aa)
Glutamate--ammonia ligase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U711_MYXSD
glutamate--ammonia ligase
Glutamate--ammonia ligase {ECO:0000313|EMBL:AGC42274.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
B_1_S1_Biohub_coassembly_k141_5247707_21
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25753..26310
DNA (558bp) protein (186aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0003642FA4
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB17670.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
B_1_S1_Biohub_coassembly_k141_5247707_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

26307..26702
DNA (396bp) protein (132aa)
id=5225159 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
B_1_S1_Biohub_coassembly_k141_5247707_23
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27453..28739
DNA (1287bp) protein (429aa)
hypothetical protein Tax=Thiothrix flexilis RepID=UPI00035FEB0E
Uncharacterized protein {ECO:0000313|EMBL:BAI71621.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
membrane protein
B_1_S1_Biohub_coassembly_k141_5247707_24
unknown

Not on your lists

28736..29641
DNA (906bp) protein (302aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5247707_25
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

29659..33150
DNA (3492bp) protein (1164aa)
Adenylyl cyclase class-3/4/guanylyl cyclase bin=GWC2_Chloroflexi_73_18 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
adenylate/guanylate cyclase
Tax=GWC2_RIF_CHLX_73_18_curated
B_1_S1_Biohub_coassembly_k141_5247707_26
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

33181..33966
DNA (786bp) protein (262aa)
pa1G; platelet-activating factor acetylhydrolase IB gamma subunit (EC:3.1.1.47)
Putative platelet-activating factor acetylhydrolase IB gamma subunit bin=GWF2_Lentisphaerae_50_93 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
B_1_S1_Biohub_coassembly_k141_5247707_27
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

33963..34697
DNA (735bp) protein (245aa)
RNA polymerase subunit sigma-24 Tax=Schlesneria paludicola RepID=UPI00029A77F8
DNA-directed RNA polymerase subunit sigma24
Tax=GWF2_Verrucomicrobia_62_7_curated
B_1_S1_Biohub_coassembly_k141_5247707_28
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

34795..36240
DNA (1446bp) protein (482aa)
pknB; serine/threonine kinase Pkn10 (EC:2.7.1.-)
Serine/threonine protein kinase Tax=Rhodopirellula europaea SH398 RepID=M5S3N7_9PLAN
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
B_1_S1_Biohub_coassembly_k141_5247707_29
unknown

Not on your lists

comp(36212..36385)
DNA (174bp) protein (58aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5247707_30
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(36507..37739)
DNA (1233bp) protein (411aa)
Tax=RBG_16_Planctomycetes_43_13_curated
Displaying items 1-30 of 54 in total

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