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B_1_S1_Biohub_coassembly_k141_5383527

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5383527_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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380..1654
DNA (1275bp) protein (425aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D930_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17075.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_5383527_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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1651..3195
DNA (1545bp) protein (515aa)
hypothetical protein Tax=Streptomyces RepID=UPI00037AD4C2
glycosyl transferase family protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
B_1_S1_Biohub_coassembly_k141_5383527_3
unknown

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3192..3602
DNA (411bp) protein (137aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5383527_4

Not on your lists

3635..4021
DNA (387bp) protein (129aa)
Uncharacterized protein Tax=Blastopirellula marina DSM 3645 RepID=A4A0K2_9PLAN
Marine sediment metagenome DNA, contig: S01H1_S22954 {ECO:0000313|EMBL:GAG15122.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_5383527_5
uncultured Chloroflexi bacterium, Chloroflexi, Bacteria

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4021..4575
DNA (555bp) protein (185aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; species="Bacteria; Chloroflexi; environmental samples.;" source="uncultured Chloroflexi bacterium.;"
Deoxycytidine triphosphate deaminase Tax=uncultured Chloroflexi bacterium RepID=H5SLA3_9CHLR
dcd; deoxycytidine triphosphate deaminase
B_1_S1_Biohub_coassembly_k141_5383527_6
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4618..4980)
DNA (363bp) protein (121aa)
CHP02436-containing protein Tax=Desulfococcus multivorans DSM 2059 RepID=S7VDP4_DESML
CHP02436-containing protein {ECO:0000313|EMBL:EPR44819.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_5383527_7
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5070..5888)
DNA (819bp) protein (273aa)
Beta-lactamase domain protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNY6_HALO1
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ACY18812.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
B_1_S1_Biohub_coassembly_k141_5383527_8
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5885..6796)
DNA (912bp) protein (304aa)
Beta-lactamase domain protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNY5_HALO1
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:ACY18811.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
B_1_S1_Biohub_coassembly_k141_5383527_9
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6951..7550
DNA (600bp) protein (200aa)
GTP cyclohydrolase 1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPJ1_KORVE
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
B_1_S1_Biohub_coassembly_k141_5383527_10
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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7802..8506
DNA (705bp) protein (235aa)
Short-chain dehydrogenase/reductase SDR Tax=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) RepID=G9MBD3_THET8
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:BAL42595.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579).;"
clavaldehyde dehydrogenase
B_1_S1_Biohub_coassembly_k141_5383527_11
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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8553..11258
DNA (2706bp) protein (902aa)
Protein kinase Tax=Sorangium cellulosum (strain So ce56) RepID=A9G7G2_SORC5
hypothetical protein
Tax=CG_Delta_07
B_1_S1_Biohub_coassembly_k141_5383527_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11262..12521
DNA (1260bp) protein (420aa)
Fmu (Sun) domain protein Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME27_RHOM4
Fmu (Sun) domain-containing protein
Fmu (Sun) domain protein {ECO:0000313|EMBL:ACY47251.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
B_1_S1_Biohub_coassembly_k141_5383527_13
Pseudomonas kilonensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12653..14056
DNA (1404bp) protein (468aa)
Pyruvate formate-lyase activating enzyme-like protein Tax=Pseudomonas fluorescens Q8r1-96 RepID=I4KN33_PSEFL
Pyruvate formate lyase-activating protein {ECO:0000313|EMBL:KKA07414.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas kilonensis.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_5383527_14
Pseudomonas brassicacearum, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14053..15192
DNA (1140bp) protein (380aa)
Cystathionine beta-lyase/cystathionine gamma-synthase Tax=Pseudomonas sp. GM50 RepID=J2T7Q3_9PSED
cystathionine gamma-synthase
Cystathionine gamma-synthase {ECO:0000313|EMBL:AHL35314.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas brassicacearum.;"
B_1_S1_Biohub_coassembly_k141_5383527_15
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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15189..15971
DNA (783bp) protein (261aa)
Fatty acid desaturase family protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DEM3_MYXXD
fatty acid desaturase
Fatty acid desaturase family protein {ECO:0000313|EMBL:ABF91529.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
B_1_S1_Biohub_coassembly_k141_5383527_16
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15968..16717
DNA (750bp) protein (250aa)
prolipoprotein diacylglyceryl transferase bin=GWE2_Firmicute_51_13 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:ETA79036.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
prolipoprotein diacylglyceryl transferase
B_1_S1_Biohub_coassembly_k141_5383527_17
GWC2_OP9X_49_35_curated, OP9X, Bacteria

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16714..17883
DNA (1170bp) protein (390aa)
Tax=GWC2_OP9X_49_35_curated
B_1_S1_Biohub_coassembly_k141_5383527_18
unknown

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17895..18521
DNA (627bp) protein (209aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5383527_19
unknown

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18518..18985
DNA (468bp) protein (156aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5383527_20
unknown

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comp(18995..20035)
DNA (1041bp) protein (347aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5383527_21
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20183..20821
DNA (639bp) protein (213aa)
Hybrid signal transduction histidine kinase J Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U1H4_MYXSD
Putative sensory histidine kinase {ECO:0000313|EMBL:EYD76033.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source="Rubellimicrobium mesophilum DSM 19309.;"
Hybrid signal transduction histidine kinase J
Displaying 21 items

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