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B_1_S1_Biohub_coassembly_k141_5497074

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5497074_1
unknown

Not on your lists

130..390
DNA (261bp) protein (87aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5497074_2
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

440..1888
DNA (1449bp) protein (483aa)
hypothetical protein Tax=Desulfospira joergensenii RepID=UPI0003B6EC71
FAD/FMN-dependent dehydrogenase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
B_1_S1_Biohub_coassembly_k141_5497074_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

1947..2972
DNA (1026bp) protein (342aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4I4_CONWI
pyridoxal-5'-phosphate-dependent protein subunit beta
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ADB52441.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
B_1_S1_Biohub_coassembly_k141_5497074_4
unknown

Not on your lists

3224..3532
DNA (309bp) protein (103aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5497074_5
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(3680..6940)
DNA (3261bp) protein (1087aa)
Peptidase S41 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJN7_RHOMR
peptidase S41
Tax=RBG_16_Planctomycetes_55_9_curated
B_1_S1_Biohub_coassembly_k141_5497074_6
unknown

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comp(7112..8341)
DNA (1230bp) protein (410aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5497074_7
unknown

Not on your lists

comp(8569..8898)
DNA (330bp) protein (110aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5497074_8
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8996..9325)
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Thermobifida fusca RepID=R9F8Y0_THEFU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ54657.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
B_1_S1_Biohub_coassembly_k141_5497074_9
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(9338..10477)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
acyl-CoA dehydrogenase
Tax=GWA1_Bdellovibrionales_52_35_curated
B_1_S1_Biohub_coassembly_k141_5497074_10
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(10539..12782)
DNA (2244bp) protein (748aa)
serine/threonine protein kinase Tax=Gemmata obscuriglobus RepID=UPI00016C58EC
hypothetical protein
Tax=RBG_16_Planctomycetes_59_8_curated
B_1_S1_Biohub_coassembly_k141_5497074_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13054..14094
DNA (1041bp) protein (347aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XRY0_9BACT
B_1_S1_Biohub_coassembly_k141_5497074_12
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14425..15717)
DNA (1293bp) protein (431aa)
Putative phytoene dehydrogenase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F2R3_ACIC5
phytoene dehydrogenase
Putative phytoene dehydrogenase {ECO:0000313|EMBL:ACO33245.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
B_1_S1_Biohub_coassembly_k141_5497074_13
unknown

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comp(15717..15962)
DNA (246bp) protein (82aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5497074_14
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15938..16840)
DNA (903bp) protein (301aa)
Phytoene/squalene synthetase (EC:2.5.1.32)
Phytoene/squalene synthetase {ECO:0000313|EMBL:CCW35104.1}; EC=2.5.1.32 {ECO:0000313|EMBL:CCW35104.1};; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Phytoene/squalene synthetase Tax=Chthonomonas calidirosea T49 RepID=S0EUQ9_9BACT
B_1_S1_Biohub_coassembly_k141_5497074_15
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(16862..17707)
DNA (846bp) protein (282aa)
Squalene/phytoene synthase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQV4_KORVE
squalene/phytoene synthase
Tax=RBG_16_Chloroflexi_64_32_curated
B_1_S1_Biohub_coassembly_k141_5497074_16
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17801..18271
DNA (471bp) protein (157aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDY84706.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDY84706.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
peroxiredoxin (EC:1.11.1.15)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA300-N18 RepID=UPI000364BAC6
B_1_S1_Biohub_coassembly_k141_5497074_17
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

Not on your lists

comp(18348..19091)
DNA (744bp) protein (248aa)
ABC transporter ATP-binding component bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
antimicrobial peptide ABC transporter ATPase
Tax=RifOxyB12_full_Planctomycetes_42_10_curated
B_1_S1_Biohub_coassembly_k141_5497074_18
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19088..20887)
DNA (1800bp) protein (600aa)
Similar to lipoprotein releasing system transmembrane protein LolC Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q115_9BACT
Similar to lipoprotein releasing system transmembrane protein LolC {ECO:0000313|EMBL:CAJ73698.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
LolC/E family lipoprotein releasing system, transmembrane protein
B_1_S1_Biohub_coassembly_k141_5497074_19
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(21048..22484)
DNA (1437bp) protein (479aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8W1_AMMDK
Tax=RBG_16_Planctomycetes_43_13_curated
B_1_S1_Biohub_coassembly_k141_5497074_20
unknown

Not on your lists

comp(22481..22822)
DNA (342bp) protein (114aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5497074_21
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23028..23612)
DNA (585bp) protein (195aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00036E2F71
DNA-binding protein {ECO:0000313|EMBL:EWM64412.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
ArsR family transcriptional regulator
B_1_S1_Biohub_coassembly_k141_5497074_22
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23700..28190)
DNA (4491bp) protein (1497aa)
Methyltransferase type 11 {ECO:0000313|EMBL:AKF06753.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_5497074_23
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(28260..29306)
DNA (1047bp) protein (349aa)
Putative PHP family metal-dependent phosphoesterase bin=GWA2_OP3_52_12 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
B_1_S1_Biohub_coassembly_k141_5497074_24
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29303..29938)
DNA (636bp) protein (212aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Phosphoglycolate phosphatase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IQ09_ANADE
B_1_S1_Biohub_coassembly_k141_5497074_25
unknown

Not on your lists

comp(30117..30821)
DNA (705bp) protein (235aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5497074_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(31042..31368)
DNA (327bp) protein (109aa)
PilT protein domain protein bin=GWF2_Planctomycetes_50_10 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
PIN domain-containing protein
Tax=RBG_16_Planctomycetes_55_9_curated
B_1_S1_Biohub_coassembly_k141_5497074_27
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31467..31697)
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Thiothrix nivea DSM 5205 RepID=I3BTV0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34793.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
B_1_S1_Biohub_coassembly_k141_5497074_28
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

31744..32817
DNA (1074bp) protein (358aa)
Glycosyl transferase group 1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SPZ2_PLABD
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADY60142.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
B_1_S1_Biohub_coassembly_k141_5497074_29
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32980..33333
DNA (354bp) protein (118aa)
Forkhead-associated protein Tax=Agromyces subbeticus RepID=UPI0003B45AC0
transmembrane ABC transporter ATP-binding protein
Transmembrane ATP-binding protein ABC transporter {ECO:0000313|EMBL:AEF37196.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
Displaying 29 items

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