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B_1_S1_Biohub_coassembly_k141_2179034

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_2179034_1

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comp(27..3005)
DNA (2979bp) protein (993aa)
Uncharacterized protein Tax=Thanatephorus cucumeris (strain AG1-IA) RepID=L8WUS3_THACA
Marine sediment metagenome DNA, contig: S03H2_L06831 {ECO:0000313|EMBL:GAH34493.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
glycosyl hydrolase
B_1_S1_Biohub_coassembly_k141_2179034_2

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comp(3173..11335)
DNA (8163bp) protein (2721aa)
Marine sediment metagenome DNA, contig: S01H1_S01625 {ECO:0000313|EMBL:GAF86978.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_2179034_3

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comp(11740..12741)
DNA (1002bp) protein (334aa)
zinc-binding alcohol dehydrogenase (EC:1.1.1.1)
Zinc-binding alcohol dehydrogenase family protein Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDI6_DESAR
Uncharacterized protein {ECO:0000313|EMBL:KKN47551.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
B_1_S1_Biohub_coassembly_k141_2179034_4
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12844..14022
DNA (1179bp) protein (393aa)
Acyl-CoA dehydrogenase-like protein Tax=marine gamma proteobacterium HTCC2143 RepID=A0YA78_9GAMM bin=RBG2 species=marine gamma proteobacterium HTCC2143 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG2 organism_group=Chloroflexi
acyl-CoA dehydrogenase domain-containing protein
Tax=RBG_13_Deltaproteobacteria_43_22_curated
B_1_S1_Biohub_coassembly_k141_2179034_5
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

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comp(14043..15641)
DNA (1599bp) protein (533aa)
Carboxyl transferase Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ID62_ACIB4
carboxyl transferase
Tax=RBG_16_Chloroflexi_48_7_curated
B_1_S1_Biohub_coassembly_k141_2179034_6
RBG_16_Chloroflexi_48_7_curated, Chloroflexi, Bacteria

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comp(15673..17316)
DNA (1644bp) protein (548aa)
Carboxyl transferase Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP30_9FIRM
carboxyl transferase
Tax=RBG_16_Chloroflexi_48_7_curated
B_1_S1_Biohub_coassembly_k141_2179034_7
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

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comp(17420..17641)
DNA (222bp) protein (74aa)
Methylmalonyl-CoA decarboxylase, gamma subunit bin=GWC2_Methylomirabilis_70_16 species=Veillonella sp. oral taxon 780 genus=Veillonella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
methylmalonyl-CoA decarboxylase, subunit gamma
Tax=RBG_13_Chloroflexi_54_8_curated
B_1_S1_Biohub_coassembly_k141_2179034_8
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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comp(17771..19198)
DNA (1428bp) protein (476aa)
aromatic ring hydroxylase Tax=Desulfurispora thermophila RepID=UPI000367A928
4-hydroxyphenylacetate 3-hydroxylase
Tax=RBG_16_Chloroflexi_48_8_curated
B_1_S1_Biohub_coassembly_k141_2179034_9
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19293..20474)
DNA (1182bp) protein (394aa)
Uncharacterized protein family UPF0324 Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XZK5_BACIE
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_50_11_curated
B_1_S1_Biohub_coassembly_k141_2179034_10
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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comp(20835..21548)
DNA (714bp) protein (238aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0Q8_CALAS
hypothetical protein
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_2179034_11
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(21558..21851)
DNA (294bp) protein (98aa)
peroxiredoxin Tax=Brevibacillus brevis RepID=UPI0003469BD5
Peroxiredoxin {ECO:0000313|EMBL:EJL22351.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
bacterioferritin comigratory protein
B_1_S1_Biohub_coassembly_k141_2179034_12
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

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comp(22036..22416)
DNA (381bp) protein (127aa)
50S ribosomal protein L7/L12 Tax=Thermoanaerobacter RepID=RL7_THEP3
50S ribosomal protein L7/L12
Tax=RBG_13_Chloroflexi_53_26_curated
B_1_S1_Biohub_coassembly_k141_2179034_13
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

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comp(22444..22968)
DNA (525bp) protein (175aa)
50S ribosomal protein L10 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K3Z3_DEHLB
50S ribosomal protein L10
Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
B_1_S1_Biohub_coassembly_k141_2179034_14
RBG_13_Chloroflexi_51_36_curated, Chloroflexi, Bacteria

Not on your lists


comp(23132..23845)
DNA (714bp) protein (238aa)
deb:DehaBAV1_0883 rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
50S ribosomal protein L1
Tax=RBG_13_Chloroflexi_51_36_curated
B_1_S1_Biohub_coassembly_k141_2179034_15
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists


comp(23872..24300)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL11_CARHZ
rplK; 50S ribosomal protein L11
Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
B_1_S1_Biohub_coassembly_k141_2179034_16
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(24382..24921)
DNA (540bp) protein (180aa)
hypothetical protein Tax=Bacteria RepID=UPI00036503C1
NusG antitermination factor
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_2179034_17
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(25011..25247)
DNA (237bp) protein (79aa)
hypothetical protein Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI00037E88E8
Preprotein translocase subunit SecE
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_2179034_18
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists


comp(25247..25414)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6Y1D5_PROPF
rpmG_2; 50S ribosomal protein L33
Tax=RBG_13_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_2179034_19
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(25467..26666)
DNA (1200bp) protein (400aa)
deb:DehaBAV1_0888 tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor EF-Tu [EC:3.6.5.3] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
translation elongation factor Tu
Tax=RBG_13_Chloroflexi_54_8_curated
B_1_S1_Biohub_coassembly_k141_2179034_trna_3
unknown

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comp(26691..26763)
DNA (73bp)
transferRNA Thr
B_1_S1_Biohub_coassembly_k141_2179034_trna_2
unknown

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comp(26809..26893)
DNA (85bp)
transferRNA Tyr
B_1_S1_Biohub_coassembly_k141_2179034_trna_1
unknown

Not on your lists

comp(26929..27001)
DNA (73bp)
transferRNA Thr
Displaying 22 items

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