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B_1_S1_Biohub_coassembly_k141_4139571

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4139571_1
unknown

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1..111
DNA (111bp) protein (37aa)
transposase Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI00037FAC1F
B_1_S1_Biohub_coassembly_k141_4139571_2
unknown

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111..215
DNA (105bp) protein (35aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4139571_3
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(266..1267)
DNA (1002bp) protein (334aa)
phosphate transporter; K03306 inorganic phosphate transporter, PiT family bin=bin3_NC10 species=Hyphomicrobium zavarzinii genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
phosphate transporter
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4139571_4

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comp(1333..1962)
DNA (630bp) protein (210aa)
Putative uncharacterized protein Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3ZAG1_DEHE1
Marine sediment metagenome DNA, contig: S06H3_S22164 {ECO:0000313|EMBL:GAI56369.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phosphate transport regulator
B_1_S1_Biohub_coassembly_k141_4139571_5
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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2468..4222
DNA (1755bp) protein (585aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_4139571_6
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(4191..5627)
DNA (1437bp) protein (479aa)
ELP3 family histone acetyltransferase (EC:2.3.1.48)
Histone acetyltransferase, ELP3 family Tax=Dehalococcoides sp. (strain BAV1) RepID=A5FRJ9_DEHSB
Tax=RBG_13_Chloroflexi_51_52_curated
B_1_S1_Biohub_coassembly_k141_4139571_7
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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6073..6714
DNA (642bp) protein (214aa)
Methyltransferase type 11 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0B2_DEHLB
methyltransferase type 11
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4139571_8
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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6986..7483
DNA (498bp) protein (166aa)
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4139571_9

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comp(7574..8233)
DNA (660bp) protein (220aa)
Ribosomal-protein acetyltransferase Tax=Dehalococcoides sp. (strain VS) RepID=D2BH99_DEHSV
Marine sediment metagenome DNA, contig: S01H1_L06036 {ECO:0000313|EMBL:GAF70306.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rimI; ribosomal-protein acetyltransferase
B_1_S1_Biohub_coassembly_k141_4139571_10
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

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8560..9324
DNA (765bp) protein (255aa)
RNA polymerase sigma-70 factor, ECF subfamily Tax=Dehalococcoides mccartyi RepID=M1QWM6_9CHLR
RNA polymerase sigma70
Tax=RBG_16_Chloroflexi_58_8_curated
B_1_S1_Biohub_coassembly_k141_4139571_11
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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9299..10216
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=Dehalococcoides mccartyi RepID=M1RB72_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4139571_12
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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10336..12093
DNA (1758bp) protein (586aa)
hypothetical protein Tax=Thiothrix disciformis RepID=UPI000363D97C
secretion protein HlyD family protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4139571_13
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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12090..12758
DNA (669bp) protein (223aa)
ABC transporter related Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TGK2_CALOO
ABC transporter-like protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4139571_14
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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12755..13993
DNA (1239bp) protein (413aa)
Macrolide export ATP-binding/permease protein MacB Tax=Sporomusa ovata DSM 2662 RepID=T0IR58_9FIRM
ABC transporter
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4139571_15
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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comp(14089..14394)
DNA (306bp) protein (102aa)
Cytotoxic translational repressor of toxin-antitoxin stability system Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y967_THIV6
cytotoxic translational repressor of toxin-antitoxin stability system
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_4139571_16
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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comp(14333..14569)
DNA (237bp) protein (79aa)
Tax=RBG_13_Chloroflexi_52_14_curated
B_1_S1_Biohub_coassembly_k141_4139571_17
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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14745..15494
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=Dehalococcoides mccartyi RepID=M1Q536_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4139571_18
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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15524..16324
DNA (801bp) protein (267aa)
Tax=RBG_13_Chloroflexi_50_10_curated
B_1_S1_Biohub_coassembly_k141_4139571_19

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comp(16436..16891)
DNA (456bp) protein (152aa)
Marine sediment metagenome DNA, contig: S03H2_S19471 {ECO:0000313|EMBL:GAH85761.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Thermonuclease bin=GWA2_Methylomirabilis_73_35 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
nuclease (SNase-like)
B_1_S1_Biohub_coassembly_k141_4139571_20

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comp(17189..17899)
DNA (711bp) protein (237aa)
hypothetical protein Tax=Cytophaga aurantiaca RepID=UPI00036D6E2C
Marine sediment metagenome DNA, contig: S01H4_S07119 {ECO:0000313|EMBL:GAG94054.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4139571_21
RBG_13_Chloroflexi_51_52_curated, Chloroflexi, Bacteria

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comp(17936..19006)
DNA (1071bp) protein (357aa)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Dehalococcoides mccartyi RepID=RUVB_DEHSB
Holliday junction DNA helicase RuvB
Tax=RBG_13_Chloroflexi_51_52_curated
B_1_S1_Biohub_coassembly_k141_4139571_22
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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19244..20581
DNA (1338bp) protein (446aa)
Putative protease/transporter Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1K7_THERP
putative protease/transporter
Tax=RBG_16_Chloroflexi_60_22_curated
B_1_S1_Biohub_coassembly_k141_4139571_23

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20578..21363
DNA (786bp) protein (262aa)
SPFH domain/band 7 family domain protein Tax=Dehalococcoides mccartyi RepID=D2BHT4_DEHSV
Marine sediment metagenome DNA, contig: S06H3_L02556 {ECO:0000313|EMBL:GAI17841.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
membrane protein
B_1_S1_Biohub_coassembly_k141_4139571_24
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(21640..22722)
DNA (1083bp) protein (361aa)
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4139571_25
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(22797..24176)
DNA (1380bp) protein (460aa)
Polysulfide reductase bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
polysulfide reductase
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4139571_26
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(24173..25054)
DNA (882bp) protein (294aa)
Fe-S-cluster-containing hydrogenase subunit bin=bin8_Chloro species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin8_Chloro organism_group=Chloroflexi
4fe-4S ferredoxin iron-sulfur binding domain-containing protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4139571_27
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(25163..25519)
DNA (357bp) protein (119aa)
Mechanosensory protein 2 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1K8_THERP
mechanosensory protein 2
Tax=RBG_16_Chloroflexi_57_8_curated
Displaying 27 items

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