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B_1_S1_Biohub_coassembly_k141_4196219

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_4196219_1

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comp(3..113)
DNA (111bp) protein (37aa)
Translation elongation factor G Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GI56_9FIRM
Marine sediment metagenome DNA, contig: S03H2_S06184 {ECO:0000313|EMBL:GAH58916.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
small GTP-binding protein
B_1_S1_Biohub_coassembly_k141_4196219_2

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comp(184..741)
DNA (558bp) protein (186aa)
Putative membrane protein Tax=Dehalococcoides mccartyi GY50 RepID=V5QBV2_9CHLR
Marine sediment metagenome DNA, contig: S12H4_L00932 {ECO:0000313|EMBL:GAI82400.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4196219_3
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

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comp(1147..2079)
DNA (933bp) protein (311aa)
Site-specific recombinase, phage integrase family Tax=Dehalococcoides mccartyi GY50 RepID=V5QBX3_9CHLR
recombinase XerC
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_4196219_4
RBG_16_Chloroflexi_56_11_curated, Chloroflexi, Bacteria

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comp(2194..3714)
DNA (1521bp) protein (507aa)
putative with similarity to BchE, but NOT Mg-protoporphyrin monomethyl ester cyclase (anaerobic) bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
radical SAM/B12-binding domain-containing protein
Tax=RBG_16_Chloroflexi_56_11_curated
B_1_S1_Biohub_coassembly_k141_4196219_trna_1
unknown

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3926..3997
DNA (72bp)
transferRNA Met
B_1_S1_Biohub_coassembly_k141_4196219_5
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

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4284..4475
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SLM1_9DELT
hypothetical protein
Tax=RBG_16_Chloroflexi_58_8_curated
B_1_S1_Biohub_coassembly_k141_4196219_6
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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4704..5666
DNA (963bp) protein (321aa)
ABC transporter permease Tax=Cupriavidus basilensis OR16 RepID=H1S7D4_9BURK
Putative glutathione transporter, permease component
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_4196219_7
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

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5829..6770
DNA (942bp) protein (314aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components Tax=uncultured delta proteobacterium HF0770_45N15 RepID=E0XYX9_9DELT
dppC; PepT family ABC transporter permease
Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
B_1_S1_Biohub_coassembly_k141_4196219_8
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

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7095..7664
DNA (570bp) protein (190aa)
Flavin reductase domain protein, FMN-binding Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LNW3_SYNFM
flavin reductase domain-containing protein
Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
B_1_S1_Biohub_coassembly_k141_4196219_9
RBG_13_Chloroflexi_46_9_curated, Chloroflexi, Bacteria

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7998..8948
DNA (951bp) protein (317aa)
oligopeptide/dipeptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
peptide ABC transporter ATPase
Tax=RBG_13_Chloroflexi_46_9_curated
B_1_S1_Biohub_coassembly_k141_4196219_10
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

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8951..9928
DNA (978bp) protein (326aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit Tax=Oscillochloris trichoides DG-6 RepID=E1IB88_9CHLR
peptide ABC transporter ATPase
Tax=RBG_13_Chloroflexi_46_14_curated
B_1_S1_Biohub_coassembly_k141_4196219_11
unknown

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10085..10276
DNA (192bp) protein (64aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_4196219_12
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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10273..11193
DNA (921bp) protein (307aa)
Putative post-translocation molecular chaperone Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1I6_THERP
putative post-translocation molecular chaperone
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4196219_13

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11220..12149
DNA (930bp) protein (310aa)
hypothetical protein Tax=Bacteria RepID=UPI000378CFC9
Marine sediment metagenome DNA, contig: S12H4_C02203 {ECO:0000313|EMBL:GAI68871.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter
B_1_S1_Biohub_coassembly_k141_4196219_14

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12146..12856
DNA (711bp) protein (237aa)
hypothetical protein Tax=Bacteria RepID=UPI00035E387E
Marine sediment metagenome DNA, contig: S01H4_S07387 {ECO:0000313|EMBL:GAG97388.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC-2 type transporter
B_1_S1_Biohub_coassembly_k141_4196219_15
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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12857..14446
DNA (1590bp) protein (530aa)
hypothetical protein Tax=Bacteria RepID=UPI0003659799
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4196219_16
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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14544..15044
DNA (501bp) protein (167aa)
hypothetical protein Tax=Bacteria RepID=UPI000360B8FD
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4196219_17
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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15068..15433
DNA (366bp) protein (122aa)
Holo-[acyl-carrier-protein] synthase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFZ3_THET1
holo-acyl-carrier-protein synthase
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_4196219_18
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

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15613..17652
DNA (2040bp) protein (680aa)
Putative uncharacterized protein Tax=Dehalococcoides sp. (strain VS) RepID=D2BGK2_DEHSV
Uncharacterized protein {ECO:0000313|EMBL:AKG53006.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
hypothetical protein
B_1_S1_Biohub_coassembly_k141_4196219_19

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17849..18304
DNA (456bp) protein (152aa)
Protein MraZ Tax=Dehalococcoides mccartyi RepID=D2BGJ2_DEHSV
Marine sediment metagenome DNA, contig: S12H4_L02756 {ECO:0000313|EMBL:GAI86993.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cell division protein MraZ
B_1_S1_Biohub_coassembly_k141_4196219_20
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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18316..19392
DNA (1077bp) protein (359aa)
Ribosomal RNA small subunit methyltransferase H Tax=Dehalococcoides sp. (strain VS) RepID=D2BGJ3_DEHSV
mraW; S-adenosyl-methyltransferase
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_4196219_21
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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19434..20681
DNA (1248bp) protein (416aa)
Cell division protein ftsA Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z9L0_DEHE1
cell division protein FtsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi CG4.;"
B_1_S1_Biohub_coassembly_k141_4196219_22
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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21048..21554
DNA (507bp) protein (169aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T1AJ04_9ZZZZ
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_58_19_curated
Displaying 23 items

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