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B_1_S1_Biohub_coassembly_k141_5263789

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
B_1_S1_Biohub_coassembly_k141_5263789_1
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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1..294
DNA (294bp) protein (98aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037CE9F1
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_2
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

315..1217
DNA (903bp) protein (301aa)
Gas vesicle protein GvpN Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5E1_GEOUR
gas vesicle protein GvpN
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_3
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

1231..1764
DNA (534bp) protein (178aa)
Heat shock protein Hsp20 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5D8_GEOUR
heat shock protein Hsp20
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_4
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

1783..3918
DNA (2136bp) protein (712aa)
ATPase AAA (EC:3.6.4.6)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003636A88
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_5
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

3919..4671
DNA (753bp) protein (251aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037CE800
Gas vesicle synthesis GvpLGvpF
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_6
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

4668..4940
DNA (273bp) protein (91aa)
hypothetical protein Tax=unclassified candidate division OP9 RepID=UPI00037FE586
Tax=CG_Dehalo_01
B_1_S1_Biohub_coassembly_k141_5263789_7
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

4924..5301
DNA (378bp) protein (126aa)
hypothetical protein Tax=Atribacteria bacterium SCGC AAA255-E04 RepID=UPI00035C44D2
gas vesicle protein GvpA
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_8
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

5326..5634
DNA (309bp) protein (103aa)
Gas vesicle K Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5A0_METTP
gas vesicle K
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_9
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

5634..6461
DNA (828bp) protein (276aa)
Gas vesicle synthesis GvpLGvpF Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4T1_DESAP
gas vesicle synthesis GvpLGvpF
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_10
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

6458..6718
DNA (261bp) protein (87aa)
Gas vesicle structural protein Tax=Clostridium sp. DL-VIII RepID=G7M010_9CLOT
gas vesicle protein GVPa
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_11
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

6705..6959
DNA (255bp) protein (85aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B60DD9
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_12
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

7341..7964
DNA (624bp) protein (208aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B2F689
hypothetical protein
Tax=RBG_16_Chloroflexi_51_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_13
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

8425..9156
DNA (732bp) protein (244aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UP96_ROSS1
hypothetical protein
Tax=RBG_16_Chloroflexi_57_8_curated
B_1_S1_Biohub_coassembly_k141_5263789_14
unknown

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comp(9310..9678)
DNA (369bp) protein (123aa)

This feature has no annotations

B_1_S1_Biohub_coassembly_k141_5263789_15
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

9935..11959
DNA (2025bp) protein (675aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00036744DA
von Willebrand factor A
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_16
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

12147..12683
DNA (537bp) protein (179aa)
hypothetical protein Tax=Desulfospira joergensenii RepID=UPI0003B68A61
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_17
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13124..13633
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Bacillus cereus RepID=J8PE32_BACCE
Uncharacterized protein {ECO:0000313|EMBL:AKB36670.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
putative ribonuclease inhibitor Barstar
B_1_S1_Biohub_coassembly_k141_5263789_18
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(13837..14724)
DNA (888bp) protein (296aa)
Putative uncharacterized protein Tax=Dehalococcoides mccartyi RepID=D3SJR7_DEHSG
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
B_1_S1_Biohub_coassembly_k141_5263789_19

Not on your lists


comp(15019..15225)
DNA (207bp) protein (69aa)
50S ribosomal protein L31 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZX08_MAHA5
Marine sediment metagenome DNA, contig: S12H4_S11482 {ECO:0000313|EMBL:GAJ13386.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L31
B_1_S1_Biohub_coassembly_k141_5263789_20

Not on your lists


comp(15230..15484)
DNA (255bp) protein (85aa)
50S ribosomal protein L27 Tax=Geobacter sulfurreducens RepID=RL27_GEOSL
Marine sediment metagenome DNA, contig: S06H3_L02860 {ECO:0000313|EMBL:GAI05656.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rpmA; 50S ribosomal protein L27
B_1_S1_Biohub_coassembly_k141_5263789_21
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists


comp(15474..16007)
DNA (534bp) protein (178aa)
rplU; ribosomal protein L21; K02888 large subunit ribosomal protein L21 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
rplU; 50S ribosomal protein L21
Tax=RBG_13_Chloroflexi_56_8b_curated
B_1_S1_Biohub_coassembly_k141_5263789_22
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16055..16690)
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IHV8_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAN33385.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
peptidase M23
B_1_S1_Biohub_coassembly_k141_5263789_23
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

16893..19364
DNA (2472bp) protein (824aa)
ATPase AAA-2 domain protein Tax=Dehalococcoides mccartyi RepID=D3SKY3_DEHSG
ATPase AAA
Tax=RBG_13_Chloroflexi_46_14_curated
B_1_S1_Biohub_coassembly_k141_5263789_24
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

19678..20718
DNA (1041bp) protein (347aa)
Heat-inducible transcription repressor hrcA Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K374_DEHLB
heat-inducible transcription repressor HrcA
Tax=RBG_13_Chloroflexi_46_14_curated
B_1_S1_Biohub_coassembly_k141_5263789_25

Not on your lists

20811..21332
DNA (522bp) protein (174aa)
Marine sediment metagenome DNA, contig: S12H4_S23527 {ECO:0000313|EMBL:GAJ19100.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GrpE protein; K03687 molecular chaperone GrpE bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
GrpE protein HSP-70 cofactor
B_1_S1_Biohub_coassembly_k141_5263789_26
RBG_16_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

Not on your lists

21356..23269
DNA (1914bp) protein (638aa)
deb:DehaBAV1_1208 dnaK; molecular chaperone DnaK (EC:1.3.1.74); K04043 molecular chaperone DnaK bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
dnaK; molecular chaperone DnaK
Tax=RBG_16_Chloroflexi_57_8_curated
Displaying 26 items

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