ggKbase home page

S_p1_S3_coassembly_k141_756938

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_756938_1
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

143..706
DNA (564bp) protein (188aa)
hypothetical protein
id=5102959 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR6
S_p1_S3_coassembly_k141_756938_2

Not on your lists

703..1371
DNA (669bp) protein (223aa)
ArsR family transcription regulator Tax=Natronomonas moolapensis 8.8.11 RepID=M1XRD6_9EURY bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO49793.1}; species="Archaea.;" source="archaeon GW2011_AR6.;"
ArsR family transcription regulator
S_p1_S3_coassembly_k141_756938_3
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(1405..2886)
DNA (1482bp) protein (494aa)
glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Tax=AR9
S_p1_S3_coassembly_k141_756938_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(2913..3911)
DNA (999bp) protein (333aa)
Transcriptional regulator Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC38_9EURY
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_756938_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

4020..4712
DNA (693bp) protein (231aa)
racD-1; aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Aspartate racemase (EC:5.1.1.13)
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_756938_6
R_OD1_Magasanikbacteria_47_16, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

4798..6576
DNA (1779bp) protein (593aa)
ABC transporter related protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
xenobiotic-transporting ATPase
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_47_16_curated
S_p1_S3_coassembly_k141_756938_7
unknown

Not on your lists

comp(6767..7303)
DNA (537bp) protein (179aa)

This feature has no annotations

S_p1_S3_coassembly_k141_756938_8
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7305..8501)
DNA (1197bp) protein (399aa)
replication factor C large subunit; K04800 replication factor C large subunit bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C large subunit
Tax=AR9
S_p1_S3_coassembly_k141_756938_9
unknown

Not on your lists

comp(8525..8776)
DNA (252bp) protein (84aa)

This feature has no annotations

S_p1_S3_coassembly_k141_756938_10
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8724..9719)
DNA (996bp) protein (332aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EM85_9BACT
hypothetical protein
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
S_p1_S3_coassembly_k141_756938_11

Not on your lists

10011..11432
DNA (1422bp) protein (474aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964};; species="Archaea.;" source="archaeon GW2011_AR9.;"
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ19_NITGG
S_p1_S3_coassembly_k141_756938_12
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(11439..11750)
DNA (312bp) protein (104aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
S_p1_S3_coassembly_k141_756938_13
R_OD1_Nomurabacteria_35_13, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11786..12403)
DNA (618bp) protein (206aa)
hypothetical protein; K07002 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_35_13_curated
S_p1_S3_coassembly_k141_756938_14
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(12423..13151)
DNA (729bp) protein (243aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
S_p1_S3_coassembly_k141_756938_15
unknown

Not on your lists

13181..13390
DNA (210bp) protein (70aa)

This feature has no annotations

S_p1_S3_coassembly_k141_756938_16
unknown

Not on your lists

13418..13846
DNA (429bp) protein (143aa)

This feature has no annotations

S_p1_S3_coassembly_k141_756938_17
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


13905..16427
DNA (2523bp) protein (841aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
valS; valyl-tRNA synthetase
Tax=AR4
S_p1_S3_coassembly_k141_756938_18
unknown

Not on your lists

comp(16405..17130)
DNA (726bp) protein (242aa)

This feature has no annotations

S_p1_S3_coassembly_k141_756938_19
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

17310..17483
DNA (174bp) protein (58aa)
hypothetical protein bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=AR9
S_p1_S3_coassembly_k141_756938_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17539..19263
DNA (1725bp) protein (575aa)
phytoene dehydrogenase Tax=Paenibacillus sp. OSY-SE RepID=UPI0002E5D009
Amine oxidase {ECO:0000313|EMBL:EJN57323.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
S_p1_S3_coassembly_k141_756938_21
Dictyostelium discoideum, Dictyostelium, Dictyosteliida, Eukaryota

Not on your lists

19287..20336
DNA (1050bp) protein (350aa)
Uncharacterized protein Tax=Dictyostelium discoideum RepID=Q54M28_DICDI
Uncharacterized protein {ECO:0000313|EMBL:EAL64296.1}; species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium discoideum (Slime mold).;"
hypothetical protein
S_p1_S3_coassembly_k141_756938_22
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

20490..21203
DNA (714bp) protein (238aa)
gph; phosphoglycolate phosphatase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
S_p1_S3_coassembly_k141_756938_23
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(21556..22278)
DNA (723bp) protein (241aa)
Putative uncharacterized protein Tax=sediment metagenome RepID=D9PHH6_9ZZZZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
S_p1_S3_coassembly_k141_756938_24
R_OD1_Kaiserbacteria_49_11, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22299..22562)
DNA (264bp) protein (88aa)
transmembrane_regions 5..25 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_11_curated
S_p1_S3_coassembly_k141_756938_25
R_OD1_Uhrbacteria_51_9, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

22668..25187
DNA (2520bp) protein (840aa)
Uncharacterized conserved protein Tax=uncultured delta proteobacterium HF0010_08B07 RepID=E0XWW1_9DELT
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_51_9_curated
S_p1_S3_coassembly_k141_756938_26
RHI_RIF_OD1_01_48_17, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(25247..26227)
DNA (981bp) protein (327aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZHI1_9BACT
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_01_48_17_curated
S_p1_S3_coassembly_k141_756938_27
unknown

Not on your lists

26335..26973
DNA (639bp) protein (213aa)

This feature has no annotations

S_p1_S3_coassembly_k141_756938_28
unknown

Not on your lists

26986..27621
DNA (636bp) protein (212aa)

This feature has no annotations

S_p1_S3_coassembly_k141_756938_29
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(27605..30112)
DNA (2508bp) protein (836aa)
Peptidase M1 membrane alanine aminopeptidase Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG43_9EURY
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:EET90513.1}; species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
Peptidase M1 membrane alanine aminopeptidase
S_p1_S3_coassembly_k141_756938_30
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

comp(30224..30709)
DNA (486bp) protein (162aa)
Putative uncharacterized protein bin=GWC1_CPR2_39_9 species=Sinorhizobium meliloti genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKQ95143.1}; species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
Displaying items 1-30 of 38 in total

View Taxonomy