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S_p1_S3_coassembly_k141_735060

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_735060_1
unknown

Not on your lists

3..86
DNA (84bp) protein (28aa)

This feature has no annotations

S_p1_S3_coassembly_k141_735060_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

335..616
DNA (282bp) protein (94aa)
hypothetical protein bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
S_p1_S3_coassembly_k141_735060_3
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(609..2090)
DNA (1482bp) protein (494aa)
Diguanylate cyclase Tax=uncultured bacterium 293 RepID=E3T615_9BACT
GAF sensor-containing diguanylate cyclase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
S_p1_S3_coassembly_k141_735060_4
Solanum tuberosum, Solanum, Solanales, asterids, Streptophyta, Viridiplantae

Not on your lists

2510..3643
DNA (1134bp) protein (378aa)
Uncharacterized protein Tax=Solanum tuberosum RepID=M1CF53_SOLTU
Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400066177}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.;" source="Solanum tuberosum (Potato).;"
S_p1_S3_coassembly_k141_735060_5
unknown

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3827..4315
DNA (489bp) protein (163aa)

This feature has no annotations

S_p1_S3_coassembly_k141_735060_6
R_RIF_OD1_13_47_10, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(4522..4986)
DNA (465bp) protein (155aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_47_10_curated
S_p1_S3_coassembly_k141_735060_7
unknown

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comp(5062..5229)
DNA (168bp) protein (56aa)

This feature has no annotations

S_p1_S3_coassembly_k141_735060_8
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5286..7106
DNA (1821bp) protein (607aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PJ00_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA90633.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
S_p1_S3_coassembly_k141_735060_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7177..8025
DNA (849bp) protein (283aa)
Peptidase, M23/M37 family bin=GWC2_Methylomirabilis_70_24 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
peptidase M23
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_735060_10
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8049..8870
DNA (822bp) protein (274aa)
Short chain dehydrogenase/reductase family oxidoreductase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U469_MYXSD
Short-chain dehydrogenase {ECO:0000313|EMBL:KFA89368.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
short chain dehydrogenase/reductase family oxidoreductase
S_p1_S3_coassembly_k141_735060_11
R_WOR_2_52_10, WOR-2, Bacteria

Not on your lists

8867..9736
DNA (870bp) protein (290aa)
nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L560_9BACT
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_52_10_curated
S_p1_S3_coassembly_k141_735060_12
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

9747..11780
DNA (2034bp) protein (678aa)
Zn-dependent oligopeptidase (EC:3.4.24.15)
Thimet oligopeptidase bin=GWA2_Elusimicrobia_66_18 species=unknown genus=unknown taxon_order=Rodentia taxon_class=Mammalia phylum=Chordata tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_735060_13
unknown

Not on your lists

12074..12712
DNA (639bp) protein (213aa)

This feature has no annotations

S_p1_S3_coassembly_k141_735060_14
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

12915..13286
DNA (372bp) protein (124aa)
SCO1 protein homolog bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
SCO1/SenC family protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
S_p1_S3_coassembly_k141_735060_15
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

13409..14170
DNA (762bp) protein (254aa)
Cytochrome c oxidase subunit II bin=GWA2_OP3_52_12 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
cyoA; Heme/copper-type cytochrome oxidase, subunit 2
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_735060_16
R_Elusimicrobia_60_11, Elusimicrobia, Bacteria

Not on your lists

14290..16020
DNA (1731bp) protein (577aa)
cytochrome C oxidase subunit I Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B64ED6
cyoB; Heme/copper-type cytochrome oxidase, subunit 1
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_60_11_curated
S_p1_S3_coassembly_k141_735060_17
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

16017..16607
DNA (591bp) protein (197aa)
Putative Cytochrome c oxidase, subunit III bin=GWC2_Ignavibacteria_56_12 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Cytochrome c oxidase, subunit III
Tax=CG_Elusi_04
S_p1_S3_coassembly_k141_735060_18
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

16604..16939
DNA (336bp) protein (112aa)
ctaF; cytochrome c oxidase subunit IV (EC:1.9.3.1)
caa(3)-type oxidase, subunit IV Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B68729
Tax=CG_Elusi_04
S_p1_S3_coassembly_k141_735060_19
unknown

Not on your lists

16980..17126
DNA (147bp) protein (49aa)

This feature has no annotations

S_p1_S3_coassembly_k141_735060_20
unknown

Not on your lists

17123..17347
DNA (225bp) protein (75aa)

This feature has no annotations

S_p1_S3_coassembly_k141_735060_21
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

Not on your lists

17358..18089
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6QM80_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
S_p1_S3_coassembly_k141_735060_22
RLO_PLX_64_10, Bacteria

Not on your lists

18292..20190
DNA (1899bp) protein (633aa)
Protoheme IX farnesyltransferase (Heme O synthase) (HemeB farnesyltransferase) bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative protoheme IX farnesyltransferase (heme O synthase)
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S_p1_S3_coassembly_k141_735060_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

20212..21162
DNA (951bp) protein (317aa)
Daunorubicin resistance ABC transporter ATPase subunit Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPH9_KORVE
daunorubicin resistance ABC transporter ATPase subunit
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p1_S3_coassembly_k141_735060_24
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

21152..21958
DNA (807bp) protein (269aa)
membrane protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B62291
ABC multidrug efflux pump, inner membrane subunit
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
S_p1_S3_coassembly_k141_735060_25
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21942..22370
DNA (429bp) protein (143aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
membrane protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 25 items

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