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S_p1_S3_coassembly_k141_982046

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_982046_1

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comp(182..970)
DNA (789bp) protein (263aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XEJ0_9BACT
Marine sediment metagenome DNA, contig: S12H4_S01077 {ECO:0000313|EMBL:GAI95120.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S_p1_S3_coassembly_k141_982046_2

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comp(973..1800)
DNA (828bp) protein (276aa)
transcriptional regulator Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4C105
Marine sediment metagenome DNA, contig: S01H1_C00094 {ECO:0000313|EMBL:GAF71724.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcriptional regulator
S_p1_S3_coassembly_k141_982046_3
unknown

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comp(1871..2680)
DNA (810bp) protein (270aa)

This feature has no annotations

S_p1_S3_coassembly_k141_982046_4
unknown

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3104..3445
DNA (342bp) protein (114aa)

This feature has no annotations

S_p1_S3_coassembly_k141_982046_5
GWA2_Elusimicrobia_51_34_curated, Elusimicrobia, Bacteria

Not on your lists

4083..4691
DNA (609bp) protein (203aa)
CsgG family protein, putative bin=GWC2_Elusimicrobia_51_8 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
curli production assembly/transport component CsgG
Tax=GWA2_Elusimicrobia_51_34_curated
S_p1_S3_coassembly_k141_982046_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(4709..6439)
DNA (1731bp) protein (577aa)
recQ; ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CBE67480.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBE67480.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
ATP-dependent DNA helicase RecQ Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJB5_9BACT
S_p1_S3_coassembly_k141_982046_7
unknown

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comp(6606..7220)
DNA (615bp) protein (205aa)

This feature has no annotations

S_p1_S3_coassembly_k141_982046_8
unknown

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comp(7269..8477)
DNA (1209bp) protein (403aa)

This feature has no annotations

S_p1_S3_coassembly_k141_982046_9
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

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comp(8633..9217)
DNA (585bp) protein (195aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00036CF0B4
phosphoesterase PA-phosphatase-like protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
S_p1_S3_coassembly_k141_982046_10
CG_Elusi_05, Elusimicrobia, Bacteria

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comp(9310..10008)
DNA (699bp) protein (233aa)
hypothetical protein bin=GWA2_Elusimicrobia_51_34 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Tax=CG_Elusi_05
S_p1_S3_coassembly_k141_982046_11
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

Not on your lists

comp(10008..10808)
DNA (801bp) protein (267aa)
Putative ABC transport system, permease component bin=GWA2_Elusimicrobia_69_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ABC-2 type transporter
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
S_p1_S3_coassembly_k141_982046_12
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(10801..11571)
DNA (771bp) protein (257aa)
ABC transporter-related protein bin=GWA2_Elusimicrobia_69_24 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
ABC transporter
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
S_p1_S3_coassembly_k141_982046_13
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

comp(11544..12722)
DNA (1179bp) protein (393aa)
Aminotransferase class V Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C431_THENR
aminotransferase class V
Tax=BJP_IG2102_Elusimicrobia_52_42
S_p1_S3_coassembly_k141_982046_14
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(12755..15184)
DNA (2430bp) protein (810aa)
Lon protease bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
ATP-dependent protease La
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
S_p1_S3_coassembly_k141_982046_15
RIFOXYB2_FULL_Elusimicrobia_50_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15153..15767)
DNA (615bp) protein (205aa)
ATP-dependent Clp protease proteolytic subunit bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
ATP-dependent Clp protease protease subunit P
Tax=RIFOXYB2_FULL_Elusimicrobia_50_12_curated
S_p1_S3_coassembly_k141_982046_16
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15769..17043)
DNA (1275bp) protein (425aa)
Trigger factor Tax=Caldithrix abyssi DSM 13497 RepID=H1XRU4_9BACT
trigger factor
Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
S_p1_S3_coassembly_k141_982046_trna_1
unknown

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17088..17169
DNA (82bp)
transferRNA Leu
S_p1_S3_coassembly_k141_982046_trna_2
unknown

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17190..17271
DNA (82bp)
transferRNA Lys
S_p1_S3_coassembly_k141_982046_17
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

comp(17278..18354)
DNA (1077bp) protein (359aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Rhodopirellula sallentina SM41 RepID=M5TSW2_9PLAN
gcpE; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
S_p1_S3_coassembly_k141_982046_18
unknown

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comp(18446..19342)
DNA (897bp) protein (299aa)

This feature has no annotations

S_p1_S3_coassembly_k141_982046_19
candidate division Zixibacteria, Bacteria

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comp(19433..20419)
DNA (987bp) protein (329aa)
Phosphoesterase PA-phosphatase-like protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHH3_9BACT
Phosphoesterase PA-phosphatase-like protein {ECO:0000313|EMBL:EQB62476.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
hypothetical protein
S_p1_S3_coassembly_k141_982046_20
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20459..23569)
DNA (3111bp) protein (1037aa)
Acriflavin resistance protein bin=GWA2_Elusimicrobia_69_24 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
acriflavin resistance protein
Tax=GWA2_Elusimicrobia_69_24_curated
S_p1_S3_coassembly_k141_982046_21
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(23556..24755)
DNA (1200bp) protein (400aa)
Outer membrane export factor bin=GWA2_Elusimicrobia_69_24 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
tolC; outer membrane export factor
Tax=GWA2_Elusimicrobia_69_24_curated
S_p1_S3_coassembly_k141_982046_trna_4
unknown

Not on your lists

comp(24904..24975)
DNA (72bp)
transferRNA Arg
S_p1_S3_coassembly_k141_982046_22
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(25291..25635)
DNA (345bp) protein (115aa)
Tax=RBG_13_Nitrospirae_39_12_curated
S_p1_S3_coassembly_k141_982046_23
unknown

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comp(25723..26007)
DNA (285bp) protein (95aa)

This feature has no annotations

S_p1_S3_coassembly_k141_982046_24
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(26038..27708)
DNA (1671bp) protein (557aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IHF7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO79410.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
S_p1_S3_coassembly_k141_982046_25
unknown

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comp(27683..28315)
DNA (633bp) protein (211aa)

This feature has no annotations

S_p1_S3_coassembly_k141_982046_trna_3
unknown

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comp(28379..28450)
DNA (72bp)
transferRNA His
S_p1_S3_coassembly_k141_982046_26
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28677..29240)
DNA (564bp) protein (188aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI000363E2D2
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:EWM18383.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
putative Isoprenylcysteine carboxyl methyltransferase
Displaying items 1-30 of 34 in total

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