ggKbase home page

S_p1_S3_coassembly_k141_2136157

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2136157_1

Not on your lists

comp(2..1030)
DNA (1029bp) protein (343aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Sensory box histidine kinase Tax=uncultured bacterium RepID=K2CYW1_9BACT
sensor histidine kinase
S_p1_S3_coassembly_k141_2136157_2
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

1092..2048
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BA34_9BACT
transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
S_p1_S3_coassembly_k141_2136157_3
RHI_OP11_Daviesbacteria_37_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

2128..2430
DNA (303bp) protein (101aa)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_37_11_curated
S_p1_S3_coassembly_k141_2136157_4
unknown

Not on your lists

comp(2433..2948)
DNA (516bp) protein (172aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2136157_5
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

3093..3332
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP91818.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
seg 31..40 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
S_p1_S3_coassembly_k141_2136157_6
unknown

Not on your lists

3413..4150
DNA (738bp) protein (246aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2136157_trna_2
unknown

Not on your lists

comp(4254..4325)
DNA (72bp)
transferRNA His
S_p1_S3_coassembly_k141_2136157_7
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(4537..6234)
DNA (1698bp) protein (566aa)
Putative uncharacterized protein (Fragment) Tax=Plesiocystis pacifica SIR-1 RepID=A6GF65_9DELT bin=ACD38 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_2136157_8
Paraprevotella xylaniphila, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6318..7253
DNA (936bp) protein (312aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella xylaniphila YIT 11841.;"
fabD; [acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QRB7_9BACT
S_p1_S3_coassembly_k141_2136157_9
unknown

Not on your lists

comp(7259..8491)
DNA (1233bp) protein (411aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2136157_10
Thermodesulfobacterium commune, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(8496..9845)
DNA (1350bp) protein (450aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium commune DSM 2178.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJD6_THEM7
3-oxoacyl-ACP synthase
S_p1_S3_coassembly_k141_2136157_11
Magnaporthe oryzae, Magnaporthe, Magnaporthales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

comp(9847..11511)
DNA (1665bp) protein (555aa)
oxidoreductase Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI0003489C15
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ELQ37324.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Magnaporthales; Magnaporthaceae; Magnaporthe.;" source="Magnaporthe oryzae (strain Y34) (Rice blast fungus) (Pyricularia; oryzae).;"
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
S_p1_S3_coassembly_k141_2136157_12
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11512..12354)
DNA (843bp) protein (281aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100) bin=bin5_DeltaP species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin5_DeltaP organism_group=Deltaproteobacteria
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
S_p1_S3_coassembly_k141_2136157_13
R_RIF_OP11_01_40_20, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

12504..13208
DNA (705bp) protein (235aa)
Transcriptional regulator Tax=Bacillus azotoformans LMG 9581 RepID=K6DKY9_BACAZ
putative Flp/Fnr family transcriptional regulator
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_01_40_20_curated
S_p1_S3_coassembly_k141_2136157_14
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(13225..13611)
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ66759.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_24.;"
S_p1_S3_coassembly_k141_2136157_15
GWA2_OP11_42_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

13993..15339
DNA (1347bp) protein (449aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Polymerase IV protein {ECO:0000313|EMBL:KKS69393.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_42_7.;"
DNA polymerase IV
S_p1_S3_coassembly_k141_2136157_16

Not on your lists

15354..16307
DNA (954bp) protein (318aa)
sti:Sthe_1157 NAD-dependent epimerase/dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD85221.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NAD-dependent epimerase/dehydratase
S_p1_S3_coassembly_k141_2136157_trna_1
unknown

Not on your lists

16363..16435
DNA (73bp)
transferRNA Arg
S_p1_S3_coassembly_k141_2136157_17
R_OP11_Daviesbacteria_36_13, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

16507..16761
DNA (255bp) protein (85aa)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_36_13_curated
S_p1_S3_coassembly_k141_2136157_18
R_OP11_Daviesbacteria_36_13, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

16742..17134
DNA (393bp) protein (131aa)
hypothetical protein bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_36_13_curated
S_p1_S3_coassembly_k141_2136157_19
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

17214..17915
DNA (702bp) protein (234aa)
coiled-coil 28..56 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR42434.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC2_40_12.;"
S_p1_S3_coassembly_k141_2136157_20
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

17902..18252
DNA (351bp) protein (117aa)
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_2136157_21
R_OP11_Daviesbacteria_41_45, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(18275..18835)
DNA (561bp) protein (187aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DE65_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_41_45_curated
S_p1_S3_coassembly_k141_2136157_22
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

19308..19706
DNA (399bp) protein (133aa)
Glyoxalase family protein superfamily Tax=uncultured bacterium RepID=K2DKP1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR16701.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
glyoxalase family protein
S_p1_S3_coassembly_k141_2136157_23
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

19703..20398
DNA (696bp) protein (232aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
hypothetical protein bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_38_18_curated
S_p1_S3_coassembly_k141_2136157_24
unknown

Not on your lists

comp(20778..20879)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 26 items

View Taxonomy