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S_p1_S3_coassembly_k141_2280997

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_2280997_1
unknown

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comp(26..844)
DNA (819bp) protein (273aa)

This feature has no annotations

S_p1_S3_coassembly_k141_2280997_2
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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1497..2468
DNA (972bp) protein (324aa)
id=1250571 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
S_p1_S3_coassembly_k141_2280997_3
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(2571..4796)
DNA (2226bp) protein (742aa)
topA; DNA topoisomerase I (topA) (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
DNA topoisomerase I
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_2280997_4
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(4829..6466)
DNA (1638bp) protein (546aa)
Tax=RBG_13_Nitrospirae_43_8_curated
S_p1_S3_coassembly_k141_2280997_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(6487..7026)
DNA (540bp) protein (180aa)
transmembrane_regions bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_2280997_6
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(7045..7557)
DNA (513bp) protein (171aa)
hypothetical protein Tax=Sulfolobales archaeon Acd1 RepID=UPI00036C0FD3
hypothetical protein
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_2280997_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(7558..8211)
DNA (654bp) protein (218aa)
Helicase domain protein Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S846_METSF
helicase domain protein
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_2280997_8
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(8211..9644)
DNA (1434bp) protein (478aa)
Helicase-associated endonuclease for fork-structured DNA Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JJ98_THEKO
ATP-dependent RNA helicase
Tax=RBG_16_Micrarchaeota_49_10_curated
S_p1_S3_coassembly_k141_2280997_9
nanoarchaeote Nst1, Nanoarchaeota, Archaea

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comp(9762..10175)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=nanoarchaeote Nst1 RepID=R1E5B2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EOD42542.1}; species="Archaea; Nanoarchaeota.;" source="nanoarchaeote Nst1.;"
hypothetical protein
S_p1_S3_coassembly_k141_2280997_10
AR11, Woesearchaeaota, DPANN, Archaea

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10232..10897
DNA (666bp) protein (222aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
S_p1_S3_coassembly_k141_2280997_11
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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10937..11620
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Thermococcus litoralis DSM 5473 RepID=H3ZKH8_THELI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHR79580.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strain ATCC 51850 / DSM 5473 / JCM 8560 /; NS-C).;"
S_p1_S3_coassembly_k141_2280997_12
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(11621..12178)
DNA (558bp) protein (186aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
Non-canonical purine NTP pyrophosphatase Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BDS9_METIK
nucleoside-triphosphatase rdgB
S_p1_S3_coassembly_k141_2280997_trna_1
unknown

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12229..12311
DNA (83bp)
transferRNA Ser
S_p1_S3_coassembly_k141_2280997_13

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12486..12863
DNA (378bp) protein (126aa)
deoxyribonuclease/rho motif-related TRAM bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:KHO47796.1}; species="Archaea.;" source="archaeon GW2011_AR5.;"
putative RNA-binding protein, contains TRAM domain
S_p1_S3_coassembly_k141_2280997_14
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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12912..13400
DNA (489bp) protein (163aa)
Putative membrane protein Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6UAN8_9EURY
Putative membrane protein {ECO:0000313|EMBL:EKQ55634.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium sp. Maddingley MBC34.;"
hypothetical protein
S_p1_S3_coassembly_k141_2280997_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

13385..14713
DNA (1329bp) protein (443aa)
MiaB-like tRNA modifying enzyme Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1H8_NITMS
MiaB-like tRNA modifying enzyme
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_2280997_16
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

14775..15212
DNA (438bp) protein (146aa)
S-adenosylmethionine decarboxylase proenzyme (AdoMetDC)(SamDC) Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YF21_DICT6
S-adenosylmethionine decarboxylase
Tax=CG_Micra_05
S_p1_S3_coassembly_k141_2280997_17
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(15202..16656)
DNA (1455bp) protein (485aa)
glutamyl-tRNA(gln) amidotransferase subunit e (EC:6.3.5.7); K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Glutamyl-tRNA(Gln) amidotransferase subunit E
Tax=CG_Aenigma_01
S_p1_S3_coassembly_k141_2280997_18
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(16653..17987)
DNA (1335bp) protein (445aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D Tax=Pyrococcus furiosus RepID=GATD_PYRFU
glutamyl-tRNA(Gln) amidotransferase subunit D
Tax=CG_Micra_05
Displaying 19 items

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