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S_p1_S3_coassembly_k141_249809

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_249809_1
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

216..377
DNA (162bp) protein (54aa)
Tax=CG_Pacearch_03
S_p1_S3_coassembly_k141_249809_2
unknown

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comp(409..798)
DNA (390bp) protein (130aa)

This feature has no annotations

S_p1_S3_coassembly_k141_249809_trna_1
unknown

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893..967
DNA (75bp)
transferRNA Lys
S_p1_S3_coassembly_k141_249809_3
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(975..1829)
DNA (855bp) protein (285aa)
Dihydrodipicolinate reductase Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZYU5_DESOH
dihydrodipicolinate reductase
Tax=CG_Falkow_04
S_p1_S3_coassembly_k141_249809_4
AR9, Woesearchaeaota, DPANN, Archaea

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comp(1884..2162)
DNA (279bp) protein (93aa)
seg bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR9
S_p1_S3_coassembly_k141_249809_5
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2204..2482)
DNA (279bp) protein (93aa)
regulatory protein MarR bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
S_p1_S3_coassembly_k141_249809_6
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

2628..3908
DNA (1281bp) protein (427aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036938B4
Serine-tRNA ligase
Tax=CG_Pacearch_05
S_p1_S3_coassembly_k141_249809_7
unknown

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3959..4456
DNA (498bp) protein (166aa)

This feature has no annotations

S_p1_S3_coassembly_k141_249809_8
unknown

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4458..5447
DNA (990bp) protein (330aa)

This feature has no annotations

S_p1_S3_coassembly_k141_249809_9
unknown

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5444..6274
DNA (831bp) protein (277aa)

This feature has no annotations

S_p1_S3_coassembly_k141_249809_10
CG_Woesearch_01, Woesearchaeota, Archaea

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6385..6690
DNA (306bp) protein (102aa)
id=5046822 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=CG_Woesearch_01
S_p1_S3_coassembly_k141_249809_11

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6869..7477
DNA (609bp) protein (203aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00038023B2
Marine sediment metagenome DNA, contig: S06H3_S00072 {ECO:0000313|EMBL:GAI20939.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Metallophosphoesterase
S_p1_S3_coassembly_k141_249809_12
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(7474..8406)
DNA (933bp) protein (311aa)
hypothetical protein Tax=WS1 bacterium JGI 0000059-K21 RepID=UPI00036276E7
ret; Reverse transcriptase RT-Ne144
Tax=RBG_13_Pacearchaeota_36_9_curated
S_p1_S3_coassembly_k141_249809_13

Not on your lists

8522..9259
DNA (738bp) protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO48691.1}; species="Archaea.;" source="archaeon GW2011_AR1.;"
S_p1_S3_coassembly_k141_249809_14
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

9216..9356
DNA (141bp) protein (47aa)
Tax=CG_Pacearch_01
S_p1_S3_coassembly_k141_249809_15
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

9456..11552
DNA (2097bp) protein (699aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003703E52
DNA topoisomerase 1
Tax=AR20
S_p1_S3_coassembly_k141_249809_16

Not on your lists

11518..12087
DNA (570bp) protein (190aa)
id=5045972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45782.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
lpxtg-motif cell wall anchor domain protein
S_p1_S3_coassembly_k141_249809_17

Not on your lists

comp(12076..12675)
DNA (600bp) protein (200aa)
DNA repair and recombination protein RadB Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6USB2_METVS bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA repair and recombination protein RadB
DNA repair and recombination protein RadB {ECO:0000313|EMBL:AJF62476.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
S_p1_S3_coassembly_k141_249809_18
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

12714..13124
DNA (411bp) protein (137aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376420B
hypothetical protein
Tax=AR13
S_p1_S3_coassembly_k141_249809_19

Not on your lists

13146..16004
DNA (2859bp) protein (953aa)
Putative cell division cycle protein 48 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W6B6_UNCMA
Uncharacterized protein {ECO:0000313|EMBL:KHO49114.1}; species="Archaea.;" source="archaeon GW2011_AR9.;"
cdc48-1; putative cell division cycle protein 48
S_p1_S3_coassembly_k141_249809_20
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(15996..17282)
DNA (1287bp) protein (429aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000255|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00041}; Short=CysRS {ECO:0000255|HAMAP-Rule:MF_00041};; species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12).;"
Cysteine--tRNA ligase Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=SYC_DICT6
S_p1_S3_coassembly_k141_249809_21

Not on your lists

comp(17431..17964)
DNA (534bp) protein (178aa)
hypothetical protein
id=5103312 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62593.1}; species="Archaea.;" source="archaeon GW2011_AR20.;"
Displaying 22 items

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