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S_p1_S3_coassembly_k141_476060

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_476060_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2..451
DNA (450bp) protein (150aa)
HAD superfamily (Subfamily IA) hydrolase, TIGR02254 bin=GWA2_Methylomirabilis_73_35 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
HAD-superfamily hydrolase
Tax=GWA2_Rokubacteria_73_35_curated
S_p1_S3_coassembly_k141_476060_2
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

575..1975
DNA (1401bp) protein (467aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WFZ9_DESOD
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AET69514.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
S_p1_S3_coassembly_k141_476060_3
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(2012..2662)
DNA (651bp) protein (217aa)
Flagellar motor switch protein FliN Tax=Desulfovibrio fructosivorans JJ RepID=E1JV99_DESFR
Flagellar motor switch protein FliN
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_476060_4
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2820..4187)
DNA (1368bp) protein (456aa)
Replicative DNA helicase Tax=Thermincola potens (strain JR) RepID=D5XDQ5_THEPJ
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:ADG83801.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
S_p1_S3_coassembly_k141_476060_5
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(4358..4969)
DNA (612bp) protein (204aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002E1DA90
rplI; 50S ribosomal protein L9
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
S_p1_S3_coassembly_k141_476060_6
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists


comp(5082..5354)
DNA (273bp) protein (91aa)
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
30S ribosomal protein S18
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_476060_7
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5362..5718)
DNA (357bp) protein (119aa)
30S ribosomal protein S6 Tax=Anaerophaga thermohalophila RepID=UPI0002EFA61C
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
S_p1_S3_coassembly_k141_476060_8
Brevibacillus agri, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5831..6382)
DNA (552bp) protein (184aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus agri BAB-2500.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase Tax=Brevibacillus agri BAB-2500 RepID=L5MXH6_9BACL
S_p1_S3_coassembly_k141_476060_9
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists


comp(6462..7127)
DNA (666bp) protein (222aa)
50S ribosomal protein L25 bin=GWB2_CP_45_9 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
S_p1_S3_coassembly_k141_476060_10
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7524..8273
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR Tax=alpha proteobacterium BAL199 RepID=A8TMQ2_9PROT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EDP65850.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
short-chain dehydrogenase
S_p1_S3_coassembly_k141_476060_11
unknown

Not on your lists

8503..9507
DNA (1005bp) protein (335aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0003666418
S_p1_S3_coassembly_k141_476060_12

Not on your lists

comp(9496..10830)
DNA (1335bp) protein (445aa)
Putative uncharacterized protein Tax=uncultured marine bacterium 106 RepID=Q6SHZ4_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAR37477.1}; species="Bacteria; environmental samples.;" source="uncultured marine bacterium 106.;"
UDP-N-acetylglucosamine pyrophosphorylase
S_p1_S3_coassembly_k141_476060_13
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11283..12821
DNA (1539bp) protein (513aa)
Putative uncharacterized protein Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NSQ7_CHRVO
Uncharacterized protein {ECO:0000313|EMBL:KJH66992.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum.;"
hypothetical protein
S_p1_S3_coassembly_k141_476060_14
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12868..13374)
DNA (507bp) protein (169aa)
UPI0003CFD131 related cluster Tax=unknown RepID=UPI0003CFD131
Uncharacterized protein {ECO:0000313|EMBL:ESZ32881.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
hypothetical protein
S_p1_S3_coassembly_k141_476060_15
unknown

Not on your lists

comp(13382..14560)
DNA (1179bp) protein (393aa)

This feature has no annotations

S_p1_S3_coassembly_k141_476060_16
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(14878..16272)
DNA (1395bp) protein (465aa)
NAD(P) transhydrogenase subunit beta Tax=Caldithrix abyssi DSM 13497 RepID=H1XXG3_9BACT
NAD/NADP transhydrogenase beta subunit
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
S_p1_S3_coassembly_k141_476060_17
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16284..16577)
DNA (294bp) protein (98aa)
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:KHE93435.1}; EC=1.6.1.2 {ECO:0000313|EMBL:KHE93435.1};; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
Nicotinamide nucleotide transhydrogenase, subunit alpha Tax=Caldithrix abyssi DSM 13497 RepID=H1XXG2_9BACT
hypothetical protein
S_p1_S3_coassembly_k141_476060_18
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

comp(16617..17759)
DNA (1143bp) protein (381aa)
NAD(P)(+) transhydrogenase (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha Tax=uncultured candidate division OP1 bacterium RepID=H5ST64_9BACT
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
S_p1_S3_coassembly_k141_476060_19
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18062..19237)
DNA (1176bp) protein (392aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050627}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050577};; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00470}; o-succinylbenzoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00470}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
O-succinylbenzoate synthase protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SGL7_9DELT
O-succinylbenzoic acid synthase
S_p1_S3_coassembly_k141_476060_20
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(19248..21377)
DNA (2130bp) protein (710aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_476060_21
Sulfurihydrogenibium azorense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

21966..22487
DNA (522bp) protein (174aa)
flagellar basal body-associated protein FliL Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625F87
fliL; flagellar basal body-associated protein FliL
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:ACN99733.1}; species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825).;"
S_p1_S3_coassembly_k141_476060_22
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22614..23063
DNA (450bp) protein (150aa)
flagellar motor switch protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625F89
fliN; flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:AHF01572.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
S_p1_S3_coassembly_k141_476060_23
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

23071..24147
DNA (1077bp) protein (359aa)
flagellar protein FliO Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625F8A
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_476060_24
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

24147..24911
DNA (765bp) protein (255aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI0003788379
fliP; flagellar biosynthetic protein FliP
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_476060_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24987..25256
DNA (270bp) protein (90aa)
flagellar biosynthesis protein FliQ Tax=Desulfovibrio desulfuricans RepID=UPI0003758965
fliQ; putative flagellar biosynthetic protein FliQ
Tax=CG_Rhodof_02
S_p1_S3_coassembly_k141_476060_26
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

25296..26462
DNA (1167bp) protein (389aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00037CB6CE
Uncharacterized protein {ECO:0000313|EMBL:EDL58131.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
S_p1_S3_coassembly_k141_476060_27
unknown

Not on your lists

26470..27084
DNA (615bp) protein (205aa)
hypothetical protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626F7D
S_p1_S3_coassembly_k141_476060_28
unknown

Not on your lists

27147..27803
DNA (657bp) protein (219aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002896439
S_p1_S3_coassembly_k141_476060_29
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

27851..29041
DNA (1191bp) protein (397aa)
hypothetical protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627337
Tetratricopeptide TPR_1 repeat-containing protein
Tax=RBG_13_Chloroflexi_54_9_curated
S_p1_S3_coassembly_k141_476060_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29050..29739
DNA (690bp) protein (230aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002D92D36
Uncharacterized protein {ECO:0000313|EMBL:KIC92718.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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