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S_p1_S3_coassembly_k141_432424

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_432424_1
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(332..610)
DNA (279bp) protein (93aa)
hypothetical protein Tax=Meiothermus timidus RepID=UPI00036CF92F
protein of unknown function (DUF1858)
Uncharacterized protein {ECO:0000313|EMBL:AFH40159.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus JL-18.;"
S_p1_S3_coassembly_k141_432424_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

921..2513
DNA (1593bp) protein (531aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter peptide-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_432424_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2733..4334
DNA (1602bp) protein (534aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_432424_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4579..6180
DNA (1602bp) protein (534aa)
ABC transporter peptide-binding protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89VQ2_BRADU
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC57368.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
ABC transporter peptide-binding protein
S_p1_S3_coassembly_k141_432424_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6335..7942
DNA (1608bp) protein (536aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter peptide-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_432424_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8181..9779
DNA (1599bp) protein (533aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_432424_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9926..11527
DNA (1602bp) protein (534aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter peptide-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
S_p1_S3_coassembly_k141_432424_8
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11673..12725)
DNA (1053bp) protein (351aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39YS8_GEOMG
Uncharacterized protein {ECO:0000313|EMBL:KJS29324.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatitalea sp. BRH_c12.;"
hypothetical protein
S_p1_S3_coassembly_k141_432424_9
Leptospira weilii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12886..13389)
DNA (504bp) protein (168aa)
Probable thiol peroxidase {ECO:0000256|HAMAP-Rule:MF_00269}; EC=1.11.1.- {ECO:0000256|HAMAP-Rule:MF_00269};; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira weilii serovar Ranarum str. ICFT.;"
Probable thiol peroxidase Tax=Leptospira alstoni RepID=M6CUR3_9LEPT
peroxiredoxin
S_p1_S3_coassembly_k141_432424_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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13596..14474
DNA (879bp) protein (293aa)
atm:ANT_29930 formate/nitrite transporter; K06212 formate transporter bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
formate/nitrite transporter
Tax=RBG_16_Chloroflexi_63_12_curated
S_p1_S3_coassembly_k141_432424_11
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

14776..15195
DNA (420bp) protein (140aa)
histidine triad (HIT) protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262929A
Histidine triad (HIT) protein {ECO:0000313|EMBL:KKR96872.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
histidine triad (HIT) protein
S_p1_S3_coassembly_k141_432424_12
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15224..15763)
DNA (540bp) protein (180aa)
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 Tax=Chthonomonas calidirosea T49 RepID=S0EX89_9BACT
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 {ECO:0000313|EMBL:CCW36342.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
S_p1_S3_coassembly_k141_432424_13
Arabidopsis thaliana, Arabidopsis, Brassicales, rosids, Streptophyta, Viridiplantae

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comp(15813..18959)
DNA (3147bp) protein (1049aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI00035C1610
Protease-like protein {ECO:0000313|EMBL:CAB66104.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.;" source="Arabidopsis thaliana (Mouse-ear cress).;"
protease III
S_p1_S3_coassembly_k141_432424_14
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

19269..20633
DNA (1365bp) protein (455aa)
Aminotransferase class-III Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NI36_ROSCS
class III aminotransferase
Aminotransferase class-III {ECO:0000313|EMBL:ABU57136.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
S_p1_S3_coassembly_k141_432424_15
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

20800..21318
DNA (519bp) protein (173aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase bin=GWB2_Chloroflexi_54_36 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Tax=CG_Anaero_03
S_p1_S3_coassembly_k141_432424_16
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21315..22907
DNA (1593bp) protein (531aa)
Allergen V5/Tpx-1 Tax=Beggiatoa sp. PS RepID=A7BT93_9GAMM
Allergen V5/Tpx-1 {ECO:0000313|EMBL:EDN70243.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
putative lipoprotein
S_p1_S3_coassembly_k141_432424_17
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

comp(22948..23256)
DNA (309bp) protein (103aa)
Methyl-accepting chemotaxis protein bin=GWF2_Melainabacteria_37_15 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
hypothetical protein
Tax=GWA2_Nitrospirae_42_11_curated
S_p1_S3_coassembly_k141_432424_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23375..24337)
DNA (963bp) protein (321aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD89_RHOM4
pyridoxal-5'-phosphate-dependent protein subunit beta
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ACY49001.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
S_p1_S3_coassembly_k141_432424_19
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

24975..25574
DNA (600bp) protein (200aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_432424_20
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(25596..25922)
DNA (327bp) protein (109aa)
Tax=RBG_16_Chloroflexi_54_11_curated
S_p1_S3_coassembly_k141_432424_21
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

26308..26727
DNA (420bp) protein (140aa)
Preprotein translocase, YajC subunit Tax=Desulfovibrio fructosivorans JJ RepID=E1JWL4_DESFR
preprotein translocase subunit YajC
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_432424_22
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

26767..28338
DNA (1572bp) protein (524aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI000319E332
secD; preprotein translocase subunit D
Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
S_p1_S3_coassembly_k141_432424_23
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28418..29347
DNA (930bp) protein (310aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B06 RepID=UPI000367BFCF
secF; protein-export membrane protein SecF
Tax=CG_Delta_03
S_p1_S3_coassembly_k141_432424_24
Desulfurispirillum indicum, Desulfurispirillum, Chrysiogenales, Chrysiogenetes, Chrysiogenetes, Bacteria

Not on your lists

comp(29421..29825)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W2F5_DESIS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU66705.1}; Flags: Precursor;; species="Bacteria; Chrysiogenetes; Chrysiogenales; Chrysiogenaceae; Desulfurispirillum.;" source="Desulfurispirillum indicum (strain ATCC BAA-1389 / S5).;"
S_p1_S3_coassembly_k141_432424_25
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30083..33838
DNA (3756bp) protein (1252aa)
N-methylhydantoinase B/acetone carboxylase, alpha subunit (EC:3.5.2.9)
5-oxoprolinase Tax=Desulfobacter curvatus RepID=UPI0003783F98
N-methylhydantoinase B/acetone carboxylase, alpha subunit {ECO:0000313|EMBL:EIM64842.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter postgatei 2ac9.;"
S_p1_S3_coassembly_k141_432424_26
RLO_PLX_64_10, Bacteria

Not on your lists

33835..35214
DNA (1380bp) protein (460aa)
Major facilitator superfamily MFS_1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6K9_ANADF
major facilitator superfamily transporter
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S_p1_S3_coassembly_k141_432424_27
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

35291..36859
DNA (1569bp) protein (523aa)
argininosuccinate lyase (EC:4.3.2.1)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI000302A7BA
Tax=BJP_IG2102_BRC1_58_13
S_p1_S3_coassembly_k141_432424_28
unknown

Not on your lists

comp(36893..37489)
DNA (597bp) protein (199aa)

This feature has no annotations

S_p1_S3_coassembly_k141_432424_29
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(37513..37923)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YFS0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ89292.1}; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
S_p1_S3_coassembly_k141_432424_30
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38177..39190
DNA (1014bp) protein (338aa)
Uncharacterized protein Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAK2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW33156.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
luciferase-like monooxygenase
Displaying 30 items

View Taxonomy