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S_p1_S3_coassembly_k141_618971

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_618971_1
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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609..1676
DNA (1068bp) protein (356aa)
DAHP synthetase I/KDSA Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYC9_OPITP
DAHP synthetase I/KDSA
DAHP synthetase I/KDSA {ECO:0000313|EMBL:ACB77027.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
S_p1_S3_coassembly_k141_618971_2
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

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1792..2064
DNA (273bp) protein (91aa)
Uncharacterized protein family UPF0016 Tax=gamma proteobacterium NOR5-3 RepID=B8KJR4_9GAMM
Uncharacterized protein family UPF0016 {ECO:0000313|EMBL:EED32143.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
hypothetical protein
S_p1_S3_coassembly_k141_618971_3
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2240..3010
DNA (771bp) protein (257aa)
ABC transporter related Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X9C2_METSD
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ACT49742.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
S_p1_S3_coassembly_k141_618971_4
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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3010..3819
DNA (810bp) protein (270aa)
ABC-2 type transporter Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X9C1_METSD
ABC-2 type transporter
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
S_p1_S3_coassembly_k141_618971_5
CSP1_5_NC10, NC10, Bacteria

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3887..4228
DNA (342bp) protein (114aa)
ArsR family transcriptional regulator bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
ArsR family transcriptional regulator
Tax=CSP1_5_NC10
S_p1_S3_coassembly_k141_618971_6
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4288..4470
DNA (183bp) protein (61aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY75111.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
S_p1_S3_coassembly_k141_618971_7
R_NC10_66_22, NC10, Bacteria

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4546..4995
DNA (450bp) protein (150aa)
activator of Hsp90 ATPase 1 family protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Activator of Hsp90 ATPase 1 family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p1_S3_coassembly_k141_618971_8
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5012..6691)
DNA (1680bp) protein (560aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NDP9_DESAR
Tax=RBG_13_Deltaproteobacteria_60_28_curated
S_p1_S3_coassembly_k141_618971_trna_1
unknown

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comp(6789..6860)
DNA (72bp)
transferRNA Gln
S_p1_S3_coassembly_k141_618971_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7138..8154)
DNA (1017bp) protein (339aa)
ABC transporter substrate-binding protein Tax=Paenibacillus ginsengihumi RepID=UPI00036EED86
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S_p1_S3_coassembly_k141_618971_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8151..9674)
DNA (1524bp) protein (508aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI0003718B0B
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S_p1_S3_coassembly_k141_618971_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9688..10152)
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YP98_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
S_p1_S3_coassembly_k141_618971_12
unknown

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comp(10131..10796)
DNA (666bp) protein (222aa)

This feature has no annotations

S_p1_S3_coassembly_k141_618971_13
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10829..12145)
DNA (1317bp) protein (439aa)
PhoH family protein Tax=Geobacter sp. (strain M18) RepID=E8WIA1_GEOS8
PhoH
PhoH {ECO:0000313|EMBL:AJE03027.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S_p1_S3_coassembly_k141_618971_14
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12460..12867)
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Sulfuricella denitrificans skB26 RepID=S6AA55_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN35270.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
S_p1_S3_coassembly_k141_618971_15
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12955..14325)
DNA (1371bp) protein (457aa)
DNA repair protein radA bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
radA; DNA repair protein RadA
Tax=GWC2_Pelobacteraceae_58_13_curated
S_p1_S3_coassembly_k141_618971_16
unknown

Not on your lists

comp(14422..14733)
DNA (312bp) protein (104aa)

This feature has no annotations

S_p1_S3_coassembly_k141_618971_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14963..15436
DNA (474bp) protein (158aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJS4_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42876.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
S_p1_S3_coassembly_k141_618971_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15535..18291)
DNA (2757bp) protein (919aa)
CoA-binding domain protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJ87_THEM7
CoA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 19 items

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