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S_p1_S3_coassembly_k141_596923

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_596923_1
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

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2..214
DNA (213bp) protein (71aa)
tyrosine recombinase XerD Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289684C
xerD; Tyrosine recombinase XerD
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
S_p1_S3_coassembly_k141_596923_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(352..1176)
DNA (825bp) protein (275aa)
Response regulator receiver protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cytidylate kinase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
S_p1_S3_coassembly_k141_596923_3
RLO_RIF05_58_11, RIF5, Bacteria

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1772..3190
DNA (1419bp) protein (473aa)
Putative uncharacterized protein Tax=Acetonema longum DSM 6540 RepID=F7NNL9_9FIRM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
S_p1_S3_coassembly_k141_596923_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3249..4841)
DNA (1593bp) protein (531aa)
ABC transporter peptide-binding protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DMJ1_BRAJP
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGT77903.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
peptide ABC transporter substrate-binding protein
S_p1_S3_coassembly_k141_596923_5
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

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comp(5171..5446)
DNA (276bp) protein (92aa)
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_596923_6
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5705..6217)
DNA (513bp) protein (171aa)
single-stranded DNA-binding protein Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI00028A0A20
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
ssb; single-stranded DNA-binding protein
S_p1_S3_coassembly_k141_596923_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(6240..6818)
DNA (579bp) protein (193aa)
Holliday junction DNA helicase RuvA Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625779
Holliday junction ATP-dependent DNA helicase ruvA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
S_p1_S3_coassembly_k141_596923_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(6826..7308)
DNA (483bp) protein (161aa)
Holliday junction resolvase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002884524
ruvC; Holliday junction resolvase
Tax=RBG_16_Nitrospirae_64_22_curated
S_p1_S3_coassembly_k141_596923_9
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7504..8070)
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08604.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Decarboxylase bin=GWC2_Syntrophus__56_31 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
S_p1_S3_coassembly_k141_596923_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8067..8585)
DNA (519bp) protein (173aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX08603.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Sulfopyruvate decarboxylase subunit alpha bin=GWC2_Syntrophus__56_31 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
decarboxylase
S_p1_S3_coassembly_k141_596923_11
unknown

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9169..10140
DNA (972bp) protein (324aa)

This feature has no annotations

S_p1_S3_coassembly_k141_596923_12
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10294..10632
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FEK5_DESAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL03409.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
S_p1_S3_coassembly_k141_596923_13
Chloroflexus sp. Y-400-fl, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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10781..11749
DNA (969bp) protein (323aa)
Methionine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000255|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00098}; Short=MetRS {ECO:0000255|HAMAP-Rule:MF_00098};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl).;"
Methionine--tRNA ligase Tax=Chloroflexus RepID=SYM_CHLAA
methionyl-tRNA synthetase
Displaying 13 items

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