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S_p1_S3_coassembly_k141_798087

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_798087_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

S_p1_S3_coassembly_k141_798087_2
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(153..863)
DNA (711bp) protein (237aa)
Short-chain dehydrogenase/reductase SDR Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARQ5_RUBXD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABG05923.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
S_p1_S3_coassembly_k141_798087_3
unknown

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1487..5023
DNA (3537bp) protein (1179aa)

This feature has no annotations

S_p1_S3_coassembly_k141_798087_4
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(5126..6718)
DNA (1593bp) protein (531aa)
mammalian cell entry domain-containing protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626B0F
mammalian cell entry domain-containing protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
S_p1_S3_coassembly_k141_798087_5
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6768..7562)
DNA (795bp) protein (265aa)
ABC transporter permease Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI000262632D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV67968.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfohalobium retbaense (strain DSM 5692).;"
S_p1_S3_coassembly_k141_798087_6
unknown

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comp(7562..9424)
DNA (1863bp) protein (621aa)

This feature has no annotations

S_p1_S3_coassembly_k141_798087_7
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9890..10258
DNA (369bp) protein (123aa)
30S ribosomal protein S12 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627B9F
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
S_p1_S3_coassembly_k141_798087_8

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10367..10840
DNA (474bp) protein (158aa)
30S ribosomal protein S7 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627B9E
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
30S ribosomal protein S7
S_p1_S3_coassembly_k141_798087_9
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10890..12980
DNA (2091bp) protein (697aa)
Elongation factor G 1 Tax=Geobacter metallireducens RepID=EFG1_GEOMG
fusA-3; elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
S_p1_S3_coassembly_k141_798087_10
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

13055..14254
DNA (1200bp) protein (400aa)
Elongation factor Tu Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YFW5_THEYD
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candidatus Magnetoovum chiemensis.;"
tuf1; elongation factor Tu
S_p1_S3_coassembly_k141_798087_11
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


14288..14596
DNA (309bp) protein (103aa)
30S ribosomal protein S10 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002896545
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
S_p1_S3_coassembly_k141_798087_12
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists


14688..15311
DNA (624bp) protein (208aa)
50S ribosomal protein L4 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289EFF3
LSU ribosomal protein L4P
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_798087_13
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists


15308..15592
DNA (285bp) protein (95aa)
50S ribosomal protein L23 Tax=SAR324 cluster RepID=UPI0002898DA9
50S ribosomal protein L23
Tax=RBG_16_NC10_65_8_curated
S_p1_S3_coassembly_k141_798087_14
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists


15648..16472
DNA (825bp) protein (275aa)
50S ribosomal protein L2 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002895674
ribosomal protein L2
Tax=Caldatribacterium saccharofermentans
S_p1_S3_coassembly_k141_798087_15
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists


16515..16802
DNA (288bp) protein (96aa)
30S ribosomal protein S19 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628359
30S ribosomal protein S19
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_798087_16
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16840..17169
DNA (330bp) protein (110aa)
50S ribosomal protein L22 Tax=Salinicoccus carnicancri RepID=UPI000312D333
50S ribosomal protein L22
Tax=CG_Delta_01
S_p1_S3_coassembly_k141_798087_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17243..18094
DNA (852bp) protein (284aa)
30S ribosomal protein S3 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002ED8DFA
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
S_p1_S3_coassembly_k141_798087_18
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18094..18504
DNA (411bp) protein (137aa)
50S ribosomal protein L16 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RL16_ANADF
rplP; 50S ribosomal protein L16
Tax=RBG_16_Anaeromyxobacter_69_14_curated
S_p1_S3_coassembly_k141_798087_19
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists


18512..18718
DNA (207bp) protein (69aa)
50S ribosomal protein L29 Tax=Proteobacteria bacterium CAG:495 RepID=R5R7M2_9PROT
50S ribosomal protein L29
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
S_p1_S3_coassembly_k141_798087_20
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


18699..18986
DNA (288bp) protein (96aa)
30S ribosomal protein S17 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJL4_SYNLT
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
S_p1_S3_coassembly_k141_798087_21
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19016..19384
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Hippea alviniae RepID=UPI0003B6D4E8
rplN; 50S ribosomal protein L14
Tax=CG_Desulfarul_01
S_p1_S3_coassembly_k141_798087_22
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists


19441..19758
DNA (318bp) protein (106aa)
50S ribosomal protein L24 Tax=Thermobrachium celere DSM 8682 RepID=R7RRP3_9CLOT
50S ribosomal protein L24
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
S_p1_S3_coassembly_k141_798087_23
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19798..20097
DNA (300bp) protein (100aa)
50S ribosomal protein L5 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
rplE; 50S ribosomal protein L5
Tax=GWC2_Syntrophus_56_31_curated
Displaying 23 items

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