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S_p1_S3_coassembly_k141_910087

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_910087_1
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(65..973)
DNA (909bp) protein (303aa)
GTPase Era Tax=Geobacter metallireducens RepID=ERA_GEOMG
era; GTPase Era
GTPase Era {ECO:0000255|HAMAP-Rule:MF_00367}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
S_p1_S3_coassembly_k141_910087_2
unknown

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comp(1027..1359)
DNA (333bp) protein (111aa)

This feature has no annotations

S_p1_S3_coassembly_k141_910087_3
unknown

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1560..2537
DNA (978bp) protein (326aa)

This feature has no annotations

S_p1_S3_coassembly_k141_910087_4
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2577..3533
DNA (957bp) protein (319aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
fmt; methionyl-tRNA formyltransferase fmt (EC:2.1.2.9)
methionyl-tRNA formyltransferase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI00028871D8
S_p1_S3_coassembly_k141_910087_5
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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3731..5212
DNA (1482bp) protein (494aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AAU0_ALKEH
Tax=BJP_IG2102_Gammaproteobacteria_62_140
S_p1_S3_coassembly_k141_910087_6

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5358..6797
DNA (1440bp) protein (480aa)
Hypothetical prolyl-tRNA synthetase Tax=uncultured microorganism RepID=L8B163_9ZZZZ
Hypothetical prolyl-tRNA synthetase {ECO:0000313|EMBL:BAM75722.1}; species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
prolyl-tRNA synthetase
S_p1_S3_coassembly_k141_910087_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6975..7832)
DNA (858bp) protein (286aa)
Putative membrane protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F254_ACIC5
Uncharacterized protein {ECO:0000313|EMBL:ETX05329.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
S_p1_S3_coassembly_k141_910087_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7874..9178
DNA (1305bp) protein (435aa)
Glycolate oxidase, iron-sulfur subunit Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IU00_RHOCS
glcF; glycolate oxidase, iron-sulfur subunit
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
S_p1_S3_coassembly_k141_910087_9
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9229..9612)
DNA (384bp) protein (128aa)
CBS domain containing protein Tax=Geobacter sp. (strain M21) RepID=C6E1U4_GEOSM
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:ACT17013.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
S_p1_S3_coassembly_k141_910087_10
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

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9946..10695
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MPG1_9BACT
hypothetical protein
Tax=RBG_16_Zixibacteria_40_9_curated
S_p1_S3_coassembly_k141_910087_11
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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10695..12497
DNA (1803bp) protein (601aa)
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] bin=bin3_NC10 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
S_p1_S3_coassembly_k141_910087_12
candidate division Zixibacteria, Bacteria

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12502..13266
DNA (765bp) protein (255aa)
Succinate dehydrogenase subunit B Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LF66_9BACT
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:EQB62873.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
succinate dehydrogenase and fumarate reductase iron-sulfur protein
S_p1_S3_coassembly_k141_910087_13
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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13597..13953
DNA (357bp) protein (119aa)
hypothetical protein Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037FC9BE
Uncharacterized protein {ECO:0000313|EMBL:EIG53682.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
S_p1_S3_coassembly_k141_910087_14
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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14029..14970
DNA (942bp) protein (314aa)
Radical SAM domain protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJ88_RHOMR
radical SAM domain-containing protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
S_p1_S3_coassembly_k141_910087_15
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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15202..15444
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GHQ6_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKQ67006.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanobacterium JSC-12.;"
S_p1_S3_coassembly_k141_910087_16
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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15747..16469
DNA (723bp) protein (241aa)
Putative 6-phosphogluconolactonase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I713_CALAS
putative 6-phosphogluconolactonase
Putative 6-phosphogluconolactonase {ECO:0000313|EMBL:BAM01051.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
S_p1_S3_coassembly_k141_910087_17
Synechococcus elongatus, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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16543..17952
DNA (1410bp) protein (470aa)
6-phosphogluconate dehydrogenase, decarboxylating; EC=1.1.1.44;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2).;"
6-phosphogluconate dehydrogenase, decarboxylating Tax=Synechococcus elongatus (strain PCC 7942) RepID=6PGD_SYNE7
6-phosphogluconate dehydrogenase
S_p1_S3_coassembly_k141_910087_18
unknown

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17987..18811
DNA (825bp) protein (275aa)

This feature has no annotations

S_p1_S3_coassembly_k141_910087_19
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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18868..19299
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Ilumatobacter coccineus YM16-304 RepID=M5A7Z1_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN04501.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
S_p1_S3_coassembly_k141_910087_20
unknown

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19311..19382
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 20 items

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