ggKbase home page

S_p1_S3_coassembly_k141_549628

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_549628_1
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

1..816
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BT09_9BACT
Mg chelatase, subunit ChlI
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_549628_2
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

819..3203
DNA (2385bp) protein (795aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00037DFEEB
MgtA; cation transport ATPase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_549628_3
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(3200..4240)
DNA (1041bp) protein (347aa)
sti:Sthe_1321 Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Holliday junction DNA helicase subunit RuvB
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_549628_4
RHI_OP11_Levybacteria_38_12, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(4306..4884)
DNA (579bp) protein (193aa)
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
ruvA; Holliday junction DNA helicase RuvA
Tax=RIFCSPHIGHO2_12_FULL_OP11_Levybacteria_38_12_curated
S_p1_S3_coassembly_k141_549628_5
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

4959..5399
DNA (441bp) protein (147aa)
Cupin 2 conserved barrel protein Tax=uncultured bacterium RepID=K2DXE6_9BACT
cupin domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_549628_6
R_OP11_Levybacteria_38_21, Levybacteria, Microgenomates, Bacteria

Not on your lists

5402..5695
DNA (294bp) protein (98aa)
Transcriptional regulator Tax=Leptospira biflexa serovar Patoc RepID=B0SBS5_LEPBA
transcriptional regulator
Tax=RIFCSPLOWO2_01_FULL_OP11_Levybacteria_38_21_curated
S_p1_S3_coassembly_k141_549628_7
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

5664..6089
DNA (426bp) protein (142aa)
hypothetical protein bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
conserved hypothetical protein TIGR00305
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_549628_8
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(6121..6357)
DNA (237bp) protein (79aa)
Putative uncharacterized protein Tax=Mucilaginibacter paludis DSM 18603 RepID=E3AU25_9SPHI bin=ACD37 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_549628_9
R_RIF_OP11_02_38_20, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

6678..7727
DNA (1050bp) protein (350aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2F0E3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_38_20_curated
S_p1_S3_coassembly_k141_549628_10
RHI_OD1_Moranbacteria_40_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7724..7870)
DNA (147bp) protein (49aa)
Putative uncharacterized protein bin=GWF2_Melioribacter_38_21 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_OD1_Moranbacteria_40_10_curated
S_p1_S3_coassembly_k141_549628_11
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7883..8380)
DNA (498bp) protein (166aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC Tax=uncultured bacterium RepID=K2ARE6_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
S_p1_S3_coassembly_k141_549628_12
GWB1_OP11_40_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists


8431..9198
DNA (768bp) protein (256aa)
50S ribosomal protein L25 {ECO:0000313|EMBL:KKR70859.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWB1_40_7.;"
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
S_p1_S3_coassembly_k141_549628_13
GWB1_OP11_40_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(9200..9634)
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR70858.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWB1_40_7.;"
transmembrane_regions 38..60 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
S_p1_S3_coassembly_k141_549628_14
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(9631..10521)
DNA (891bp) protein (297aa)
Valyl tRNA synthetase suspected. See adjacent gene [S_p1_S3_coassembly_k141_549628_15].
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00036B1BF8
valyl-tRNA synthetase (EC:6.1.1.9)
S_p1_S3_coassembly_k141_549628_15
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(10478..11758)
DNA (1281bp) protein (427aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI00036B1BF8
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_549628_16

Not on your lists

11892..12173
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DJL1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT64681.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA2_44_33.;"
hypothetical protein
S_p1_S3_coassembly_k141_549628_17

Not on your lists

12170..12430
DNA (261bp) protein (87aa)
Putative uncharacterized protein Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT13_9BACT bin=ACD37 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKT64680.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA2_44_33.;"
hypothetical protein
S_p1_S3_coassembly_k141_549628_18
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(12468..13769)
DNA (1302bp) protein (434aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BQJ4_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_549628_19
GWB1_OP11_37_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(13838..16519)
DNA (2682bp) protein (894aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003687EEB
Uncharacterized protein {ECO:0000313|EMBL:KKQ41396.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_37_8.;"
GDP-mannose 4,6 dehydratase ISS
S_p1_S3_coassembly_k141_549628_20
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(16616..17050)
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2AUI1_9BACT
ribonuclease H
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_549628_21
GWB1_OP11_37_8, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(17460..17927)
DNA (468bp) protein (156aa)
Single-stranded nucleic acid binding R3H domain protein {ECO:0000313|EMBL:KKQ41394.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_37_8.;"
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
single-stranded nucleic acid binding R3H domain-containing protein
S_p1_S3_coassembly_k141_549628_22
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(17909..18742)
DNA (834bp) protein (278aa)
Stage III sporulation protein J Tax=Leptotrichia goodfellowii F0264 RepID=D0GKU7_9FUSO bin=ACD30 species=Leptotrichia goodfellowii genus=Leptotrichia taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Preprotein translocase YidC subunit {ECO:0000313|EMBL:KKQ15960.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_36_8.;"
hypothetical protein
S_p1_S3_coassembly_k141_549628_23
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(18974..19306)
DNA (333bp) protein (111aa)
seg 50..71 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
ribonuclease P
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_549628_24
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

19590..20948
DNA (1359bp) protein (453aa)
bha:BH0001 dnaA; chromosomal replication initiation protein; K02313 chromosomal replication initiator protein bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
chromosomal replication initiator protein DnaA
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_549628_25
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

21137..22285
DNA (1149bp) protein (383aa)
DNA polymerase III, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA polymerase III subunit beta (EC:2.7.7.7)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_549628_26
unknown

Not on your lists

comp(22260..22637)
DNA (378bp) protein (126aa)

This feature has no annotations

S_p1_S3_coassembly_k141_549628_27
R_OP11_Levybacteria_37_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(22644..24545)
DNA (1902bp) protein (634aa)
hypothetical protein Tax=Candidatus Microgenomatus auricola SCGC AAA011-E14 RepID=UPI0003605E8A
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_10_curated
S_p1_S3_coassembly_k141_549628_28
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(24548..25180)
DNA (633bp) protein (211aa)
hypothetical protein cdiviTM7_00582 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B267C bin=ACD50 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_549628_29
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(25216..26214)
DNA (999bp) protein (333aa)
id=5086827 bin=GWF1_OP11_31_35_complete species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
S_p1_S3_coassembly_k141_549628_30
R_OP11_Levybacteria_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

26452..27111
DNA (660bp) protein (220aa)
seg 7..21 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_16_curated
Displaying items 1-30 of 35 in total

View Taxonomy