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S_p1_S3_coassembly_k141_1393489

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1393489_1
AR4, Woesearchaeaota, DPANN, Archaea

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269..844
DNA (576bp) protein (192aa)
id=5047280 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
PE-PGRS family protein
Tax=AR4
S_p1_S3_coassembly_k141_1393489_2
unknown

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841..1410
DNA (570bp) protein (190aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1393489_3

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1407..16079
DNA (14673bp) protein (4891aa)
parallel beta-helix repeat-containing protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Parallel beta-helix repeat-containing protein {ECO:0000313|EMBL:KHO45601.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
parallel beta-helix repeat-containing protein
S_p1_S3_coassembly_k141_1393489_4
unknown

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16084..16383
DNA (300bp) protein (100aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1393489_5
unknown

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comp(16384..17094)
DNA (711bp) protein (237aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1393489_6

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17302..18258
DNA (957bp) protein (319aa)
RNA methylase, NOL1/NOP2/sun family {ECO:0000313|EMBL:KHO53086.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
tRNA (Cytosine-48,49-C(5)-) methyltransferase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase, NOL1/NOP2/sun family
S_p1_S3_coassembly_k141_1393489_7
unknown

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comp(18255..18782)
DNA (528bp) protein (176aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1393489_8
AR15, Woesearchaeaota, DPANN, Archaea

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18941..19588
DNA (648bp) protein (216aa)
UPI000038E2D0 related cluster bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
LysC-like protein
Tax=AR15
S_p1_S3_coassembly_k141_1393489_9

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19791..20789
DNA (999bp) protein (333aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU003388}; EC=1.2.1.59 {ECO:0000256|RuleBase:RU003388};; species="Archaea.;" source="archaeon GW2011_AR3.;"
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
S_p1_S3_coassembly_k141_1393489_10
unknown

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20786..20920
DNA (135bp) protein (45aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1393489_11
R_OD1_Uhrbacteria_47_17, Uhrbacteria, Parcubacteria, Bacteria

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20923..21126
DNA (204bp) protein (68aa)
transmembrane_regions bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_17_curated
S_p1_S3_coassembly_k141_1393489_12
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21334..22551
DNA (1218bp) protein (406aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
Phosphoglycerate kinase Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KPU1_9FIRM
3-phosphoglycerate kinase
S_p1_S3_coassembly_k141_1393489_13

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comp(22518..23756)
DNA (1239bp) protein (413aa)
Uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46443.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
S_p1_S3_coassembly_k141_1393489_14

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23964..24272
DNA (309bp) protein (103aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|HAMAP-Rule:MF_00757}; species="Archaea.;" source="archaeon GW2011_AR15.;"
Ribonuclease P protein component 4 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNase P subunit RPR2
S_p1_S3_coassembly_k141_1393489_15

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24397..24696
DNA (300bp) protein (100aa)
Nucleotidyltransferase, putative Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A4H3_THEGJ
Marine sediment metagenome DNA, contig: S01H1_S13048 {ECO:0000313|EMBL:GAG01406.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Nucleotidyltransferase
S_p1_S3_coassembly_k141_1393489_16
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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24693..32972
DNA (8280bp) protein (2760aa)
Immunoglobulin-like repeats containing protein
cell surface protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S_p1_S3_coassembly_k141_1393489_17
unknown

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comp(32969..33274)
DNA (306bp) protein (102aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1393489_18
unknown

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comp(33271..33570)
DNA (300bp) protein (100aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1393489_19
Synechococcus sp. JA-3-3Ab, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(33779..34213)
DNA (435bp) protein (145aa)
Putative uncharacterized protein Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JX95_SYNJA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC98597.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria bacterium; Yellowstone A-Prime).;"
S_p1_S3_coassembly_k141_1393489_20

Not on your lists

34274..35164
DNA (891bp) protein (297aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JI05_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38163.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
PHP C-terminal domain protein
S_p1_S3_coassembly_k141_1393489_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

35157..35684
DNA (528bp) protein (176aa)
CDP-alcohol phosphatidyltransferase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZSR9_OPITP
CDP-alcohol phosphatidyltransferase
Tax=RBG_16_Nitrospirae_64_22_curated
S_p1_S3_coassembly_k141_1393489_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

35675..36202
DNA (528bp) protein (176aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037870E9
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
S_p1_S3_coassembly_k141_1393489_23
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

36196..36783
DNA (588bp) protein (196aa)
CTP:2, 3-di-O-geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase {ECO:0000313|EMBL:AAZ70875.1}; EC=2.7.7.- {ECO:0000313|EMBL:AAZ70875.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
CTP:2, 3-di-O-geranylgeranyl-sn-glycero-1-phosphate cytidyltransferase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46B67_METBF
phytol kinase
S_p1_S3_coassembly_k141_1393489_24
unknown

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comp(36778..37239)
DNA (462bp) protein (154aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1393489_25
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(37230..37484)
DNA (255bp) protein (85aa)
Diphthamide synthase, subunit DPH2 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
diphthamide biosynthesis protein
Tax=GWA2_WOR_2_47_8_curated
S_p1_S3_coassembly_k141_1393489_26
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(37490..38542)
DNA (1053bp) protein (351aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000255|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000255|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00394}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP; 101130 / JCM 8532 / LMG 13131).;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] Tax=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) RepID=GPDA_FUSNN
S_p1_S3_coassembly_k141_1393489_27
Halomonas sp. S2151, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(38515..39639)
DNA (1125bp) protein (375aa)
hypothetical protein Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AF03B3
Glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:KJZ14418.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. S2151.;"
glycerol-3-phosphate acyltransferase
S_p1_S3_coassembly_k141_1393489_trna_6
unknown

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comp(39702..39776)
DNA (75bp)
transferRNA Ile
S_p1_S3_coassembly_k141_1393489_trna_5
unknown

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comp(39985..40059)
DNA (75bp)
transferRNA Asn
S_p1_S3_coassembly_k141_1393489_28
unknown

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40138..41124
DNA (987bp) protein (329aa)

This feature has no annotations

Displaying items 1-30 of 134 in total

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