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S_p2_S4_coassembly_k141_1393799

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Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_1393799_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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200..1078
DNA (879bp) protein (293aa)
Uncharacterized 28.2 kDa protein in hemB 3'region Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHK8_9BACT
hypothetical protein
Uncharacterized 28.2 kDa protein in hemB 3'region {ECO:0000313|EMBL:CBE67141.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1137..1448)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHK9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67142.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(1454..1843)
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHL0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67143.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_4
CSP1_5_NC10, NC10, Bacteria

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2104..3285
DNA (1182bp) protein (394aa)
formyl-CoA transferase (EC:2.8.3.16) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
formyl-CoA transferase (EC:2.8.3.16)
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_1393799_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3369..5966)
DNA (2598bp) protein (866aa)
Chaperone Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN33_9BACT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
clpB; chaperone
S_p2_S4_coassembly_k141_1393799_6
R_NC10_66_22, NC10, Bacteria

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6181..6339
DNA (159bp) protein (53aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_1393799_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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6336..7523
DNA (1188bp) protein (396aa)
hypothetical protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
S_p2_S4_coassembly_k141_1393799_8
CSP1_5_NC10, NC10, Bacteria

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7549..8841
DNA (1293bp) protein (431aa)
peptidase C14, caspase catalytic subunit p20 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_1393799_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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9098..9901
DNA (804bp) protein (268aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PB58_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40467.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
S_p2_S4_coassembly_k141_1393799_10
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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9898..10899
DNA (1002bp) protein (334aa)
Hopanoid biosynthesis associated radical SAM protein HpnH Tax=Chthonomonas calidirosea T49 RepID=S0EW76_9BACT
hopanoid biosynthesis associated radical SAM protein HpnH
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:CCW33903.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
S_p2_S4_coassembly_k141_1393799_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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10948..12894
DNA (1947bp) protein (649aa)
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene--hopene cyclase {ECO:0000313|EMBL:CBE67168.1}; EC=5.4.99.17 {ECO:0000313|EMBL:CBE67168.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Squalene--hopene cyclase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHN5_9BACT
S_p2_S4_coassembly_k141_1393799_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12866..13660
DNA (795bp) protein (265aa)
Putative nucleoside phosphorylase (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHN4_9BACT
nucleoside phosphorylase
Putative nucleoside phosphorylase (Modular protein) {ECO:0000313|EMBL:CBE67167.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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13743..14324
DNA (582bp) protein (194aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK79_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69701.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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14516..15301
DNA (786bp) protein (262aa)
Toluene transporter subunit: membrane component of ABC superfamily Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK80_9BACT
yrbE; toluene ABC transporter subunit membrane protein
Toluene transporter subunit: membrane component of ABC superfamily {ECO:0000313|EMBL:CBE69702.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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15303..16043
DNA (741bp) protein (247aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
Putative ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:CBE69703.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBE69703.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative ABC transporter (ATP-binding protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK81_9BACT
S_p2_S4_coassembly_k141_1393799_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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16155..17108
DNA (954bp) protein (318aa)
Putative Mce family protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK82_9BACT
Mce family protein
Putative Mce family protein {ECO:0000313|EMBL:CBE69704.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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17105..19594
DNA (2490bp) protein (830aa)
Glycoside hydrolase, family 57 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK83_9BACT
glycoside hydrolase, family 57
Glycoside hydrolase, family 57 {ECO:0000313|EMBL:CBE69705.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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19655..20971
DNA (1317bp) protein (439aa)
CBS domain protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK84_9BACT
hypothetical protein
CBS domain protein {ECO:0000313|EMBL:CBE69706.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_19
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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20981..22180
DNA (1200bp) protein (400aa)
Sodium/hydrogen exchanger Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L4W8_9BACT
sodium/hydrogen exchanger
Tax=RBG_16_Zixibacteria_43_9_curated
S_p2_S4_coassembly_k141_1393799_20
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

22275..22565
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK85_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69707.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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22742..23212
DNA (471bp) protein (157aa)
Universal stress protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMX5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68075.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_1393799_22
unknown

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23570..23848
DNA (279bp) protein (93aa)

This feature has no annotations

S_p2_S4_coassembly_k141_1393799_23
R_NC10_66_22, NC10, Bacteria

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24296..24916
DNA (621bp) protein (207aa)
TetR family transcriptional regulator Tax=Actinomyces massiliensis RepID=UPI00036A0B6D
TetR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_1393799_24
R_NC10_66_22, NC10, Bacteria

Not on your lists

24900..25487
DNA (588bp) protein (196aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_1393799_25
R_NC10_66_22, NC10, Bacteria

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25536..26597
DNA (1062bp) protein (354aa)
Putative integral membrane protein bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
integral membrane protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_1393799_26
R_NC10_66_22, NC10, Bacteria

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26632..27303
DNA (672bp) protein (224aa)
Trehalose synthase/probable maltokinase bin=GWF2_Methylomirabilis_70_14 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_1393799_27
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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27300..28502
DNA (1203bp) protein (401aa)
group 1 glycosyl transferase; K13057 trehalose synthase [EC:2.4.1.245] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=bin7_NC10_sister organism_group=NC10
trehalose synthase (ADP-glucose) (EC:2.4.1.-)
Tax=CSP1_6_Rokubacteria
S_p2_S4_coassembly_k141_1393799_28
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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28596..30854
DNA (2259bp) protein (753aa)
otsA; trehalose-6-phosphate synthase; K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
Tax=RBG_16_Deltaproteobacteria_48_10_curated
S_p2_S4_coassembly_k141_1393799_29
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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30897..31649
DNA (753bp) protein (251aa)
Trehalose-phosphatase (Trehalose 6-phosphate phosphatase) (TPP) (EC:3.1.3.12)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117, ECO:0000313|EMBL:CBE68591.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative Trehalose-phosphatase (Trehalose 6-phosphate phosphatase) (TPP) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR0_9BACT
S_p2_S4_coassembly_k141_1393799_30
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

31838..34066
DNA (2229bp) protein (743aa)
glgB; 1,4-alpha-glucan-branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685, ECO:0000313|EMBL:CBE69957.1};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
1,4-alpha-glucan branching enzyme GlgB Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLQ0_9BACT
Displaying items 1-30 of 63 in total

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