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S_p2_S4_coassembly_k141_2455213

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2455213_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(436..2010)
DNA (1575bp) protein (525aa)
O-antigen polymerase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2X5_SPHTD
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ACZ38592.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
S_p2_S4_coassembly_k141_2455213_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2258..3121)
DNA (864bp) protein (288aa)
Putative O-antigen/LPS export system ATP-binding protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM81_9BACT
O-antigen/LPS export system ATP-binding protein
Putative O-antigen/LPS export system ATP-binding protein {ECO:0000313|EMBL:CBE67967.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3114..3971)
DNA (858bp) protein (286aa)
Putative O-antigen export system permease protein rfbA Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM82_9BACT
O-antigen export system permease protein rfbA
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3968..4912)
DNA (945bp) protein (315aa)
sugar-nucleotide epimerase/dehydratase (EC:4.2.1.46)
Putative sugar-nucleotide epimerase/dehydratase {ECO:0000313|EMBL:CBE69857.1}; EC=4.2.1.46 {ECO:0000313|EMBL:CBE69857.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative sugar-nucleotide epimerase/dehydratase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML15_9BACT
S_p2_S4_coassembly_k141_2455213_5
R_NC10_66_22, NC10, Bacteria

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comp(5022..6365)
DNA (1344bp) protein (448aa)
nsd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] bin=bin3_NC10 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=bin3_NC10 organism_group=NC10
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_2455213_6
R_NC10_66_22, NC10, Bacteria

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comp(6372..7370)
DNA (999bp) protein (333aa)
GDP-mannose 4,6-dehydratase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCV2_THET1
GDP-mannose 4,6-dehydratase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_2455213_7
CSP1_5_NC10, NC10, Bacteria

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comp(7367..8419)
DNA (1053bp) protein (351aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] bin=bin3_NC10 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Tax=CSP1_5_NC10
S_p2_S4_coassembly_k141_2455213_8
unknown

Not on your lists

8468..8800
DNA (333bp) protein (111aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2455213_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8932..9963)
DNA (1032bp) protein (344aa)
rfbB; dTDP-D-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473, ECO:0000313|EMBL:CBE69853.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
dTDP-glucose 4,6-dehydratase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML13_9BACT
S_p2_S4_coassembly_k141_2455213_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(10076..11140)
DNA (1065bp) protein (355aa)
strD; glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase (DTDP-glucose synthase) (DTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) {ECO:0000313|EMBL:CBE69851.1}; EC=2.7.7.24 {ECO:0000313|EMBL:CBE69851.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Glucose-1-phosphate thymidylyltransferase (DTDP-glucose synthase) (DTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML11_9BACT
S_p2_S4_coassembly_k141_2455213_11
unknown

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comp(11137..11478)
DNA (342bp) protein (114aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2455213_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(11532..11954)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN83_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70225.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(12071..13303)
DNA (1233bp) protein (411aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN84_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70226.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(13305..14045)
DNA (741bp) protein (247aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative transporter subunit: ATP-binding component of ABC superfamily Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN85_9BACT
ybbA; transporter subunit: ATP-binding component of ABC superfamily
S_p2_S4_coassembly_k141_2455213_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(14055..15494)
DNA (1440bp) protein (480aa)
Efflux transporter, RND family, MFP subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN86_9BACT
Efflux transporter, RND family, MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:CBE70228.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(15501..17120)
DNA (1620bp) protein (540aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN87_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70229.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(17488..17925)
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN88_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70230.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(17927..18430)
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN89_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70231.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(18460..19110)
DNA (651bp) protein (217aa)
Putative RNA polymerase sigma-H factor (Sigma-30) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN90_9BACT
RNA polymerase sigma-H factor (Sigma-30)
Putative RNA polymerase sigma-H factor (Sigma-30) {ECO:0000313|EMBL:CBE70232.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_20
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(19265..20722)
DNA (1458bp) protein (486aa)
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15)
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:CBE70244.1}; EC=1.1.3.15 {ECO:0000313|EMBL:CBE70244.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Glycolate oxidase, subunit GlcD Tax=Candidatus Methylomirabilis oxyfera RepID=D5MNA0_9BACT
S_p2_S4_coassembly_k141_2455213_21
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20765..21892)
DNA (1128bp) protein (376aa)
Uncharacterized protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6X7_NITMU
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_18_curated
S_p2_S4_coassembly_k141_2455213_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21865..22659)
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XCK4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62672.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
S_p2_S4_coassembly_k141_2455213_23
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(22669..24027)
DNA (1359bp) protein (453aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMI2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_2455213_24
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(24247..25608)
DNA (1362bp) protein (454aa)
FAD linked oxidase-like protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MNA1_9BACT
FAD linked oxidase-like protein
FAD linked oxidase-like protein {ECO:0000313|EMBL:CBE70245.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_25
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(25730..27097)
DNA (1368bp) protein (456aa)
hemL; glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) {ECO:0000313|EMBL:CBE70246.1}; EC=5.4.3.8 {ECO:0000313|EMBL:CBE70246.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Glutamate-1-semialdehyde 2,1-aminomutase (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MNA2_9BACT
S_p2_S4_coassembly_k141_2455213_26
R_NC10_66_22, NC10, Bacteria

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comp(27097..27393)
DNA (297bp) protein (99aa)
glutaredoxin bin=bin7_NC10_sister species=Halococcus hamelinensis genus=Halococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
glutaredoxin
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S_p2_S4_coassembly_k141_2455213_27
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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27926..29311
DNA (1386bp) protein (462aa)
Chromosomal replication initiator protein DnaA Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHJ6_9BACT
dnaA; chromosomal replication initiator protein dnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_2455213_28
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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29845..30825
DNA (981bp) protein (327aa)
Putative uncharacterized protein bin=GWF2_Melioribacter_38_21 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
putative lipoprotein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
S_p2_S4_coassembly_k141_2455213_29
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(30932..31336)
DNA (405bp) protein (135aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
S_p2_S4_coassembly_k141_2455213_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(31333..31590)
DNA (258bp) protein (86aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying items 1-30 of 50 in total

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