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S_p2_S4_coassembly_k141_3852679

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_3852679_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1..282)
DNA (282bp) protein (94aa)
Capsular polysaccharide export protein, putative bin=GWC2_Methylomirabilis_70_16 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
S_p2_S4_coassembly_k141_3852679_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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490..915
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIJ6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43083.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
S_p2_S4_coassembly_k141_3852679_3
Sulfurovum sp. NBC37-1, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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1455..1754
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QC08_SULNB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF73017.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. (strain NBC37-1).;"
S_p2_S4_coassembly_k141_3852679_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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2087..4144
DNA (2058bp) protein (686aa)
Asparagine synthetase Tax=Crinalium epipsammum PCC 9333 RepID=K9W5M8_9CYAN
asparagine synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S_p2_S4_coassembly_k141_3852679_5
unknown

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4170..4325
DNA (156bp) protein (52aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3852679_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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4609..6546
DNA (1938bp) protein (646aa)
asparagine synthase Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024850F8
asparagine synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
S_p2_S4_coassembly_k141_3852679_7
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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6582..7625
DNA (1044bp) protein (348aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-)
Hpr(Ser) kinase/phosphatase Tax=Crinalium epipsammum PCC 9333 RepID=K9W5R4_9CYAN
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
S_p2_S4_coassembly_k141_3852679_8
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7748..9562
DNA (1815bp) protein (605aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
ABC-type multidrug transport system, ATPase and permease component Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6UA17_9EURY
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
S_p2_S4_coassembly_k141_3852679_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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9653..10405
DNA (753bp) protein (251aa)
Methyltransferase type 11 bin=GWA2_Methylomirabilis_73_35 species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
S_p2_S4_coassembly_k141_3852679_10
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

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10402..11592
DNA (1191bp) protein (397aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XG48_9BACT
hypothetical protein
Tax=RBG_16_RIF03_38_11_curated
S_p2_S4_coassembly_k141_3852679_11
RLO_PLX_64_10, Bacteria

Not on your lists

comp(11770..13119)
DNA (1350bp) protein (450aa)
phosphodiesterase Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A285EB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S_p2_S4_coassembly_k141_3852679_12
RLO_PLX_64_10, Bacteria

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comp(13159..13965)
DNA (807bp) protein (269aa)
ATPase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=bin7_NC10_sister organism_group=NC10
ATPase AAA
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S_p2_S4_coassembly_k141_3852679_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(13985..14788)
DNA (804bp) protein (268aa)
ATPase bin=GWC2_Methylomirabilis_70_16 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AAA ATPase
Tax=GWC2_Rokubacteria_70_16_curated
S_p2_S4_coassembly_k141_3852679_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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15476..16153
DNA (678bp) protein (226aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00464};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S-adenosylmethionine decarboxylase proenzyme Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP0_9BACT
S-adenosylmethionine decarboxylase
S_p2_S4_coassembly_k141_3852679_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

16122..17039
DNA (918bp) protein (306aa)
speE; Spermidine synthase (Putrescine aminopropyltransferase) (PAPT) (SPDSY) (EC:2.5.1.16)
Spermidine synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP1_9BACT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3852679_16
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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17168..18631
DNA (1464bp) protein (488aa)
speA; Arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase {ECO:0000313|EMBL:CBE67175.1}; EC=4.1.1.19 {ECO:0000313|EMBL:CBE67175.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Arginine decarboxylase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP2_9BACT
S_p2_S4_coassembly_k141_3852679_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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18740..20335
DNA (1596bp) protein (532aa)
Protein translocase subunit SecD Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP3_9BACT
secD; protein-export membrane protein secD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3852679_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

20425..21363
DNA (939bp) protein (313aa)
Protein-export membrane protein SecF Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP4_9BACT
secF; protein-export membrane protein secF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3852679_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

21577..22152
DNA (576bp) protein (192aa)
gmhA; phosphoheptose isomerase (Sedoheptulose 7-phosphate isomerase) (EC:5.3.1.-)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Phosphoheptose isomerase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP5_9BACT
S_p2_S4_coassembly_k141_3852679_20
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

22168..23166
DNA (999bp) protein (333aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Putative Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CBE67179.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBE67179.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative Serine-type D-Ala-D-Ala carboxypeptidase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP6_9BACT
S_p2_S4_coassembly_k141_3852679_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

23498..24637
DNA (1140bp) protein (380aa)
DNA processing chain A (DprA/Smf) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP7_9BACT
DprA; DNA processing protein DprA
DNA processing chain A (DprA/Smf) {ECO:0000313|EMBL:CBE67180.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S_p2_S4_coassembly_k141_3852679_22
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

24738..27215
DNA (2478bp) protein (826aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CBE67181.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP8_9BACT
S_p2_S4_coassembly_k141_3852679_23
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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27212..28543
DNA (1332bp) protein (444aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP9_9BACT
hypothetical protein
Displaying 23 items

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