ggKbase home page

S_p2_S4_coassembly_k141_195627

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_195627_1
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

150..1163
DNA (1014bp) protein (338aa)
Peptidase M48 Ste24p Tax=Geobacter sp. (strain M21) RepID=C6DZ43_GEOSM
peptidase M48 Ste24p
Tax=CG_Desulfovib_01
S_p2_S4_coassembly_k141_195627_2
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

1160..1618
DNA (459bp) protein (153aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI000366737B
Uncharacterized protein {ECO:0000313|EMBL:CCQ91902.1}; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
S_p2_S4_coassembly_k141_195627_3
unknown

Not on your lists

comp(1869..2231)
DNA (363bp) protein (121aa)

This feature has no annotations

S_p2_S4_coassembly_k141_195627_4
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

comp(2384..2917)
DNA (534bp) protein (178aa)
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
S_p2_S4_coassembly_k141_195627_5
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

3223..3891
DNA (669bp) protein (223aa)
Transcriptional regulator Tax=Pleurocapsa sp. PCC 7327 RepID=K9TA89_9CYAN
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFY78929.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
S_p2_S4_coassembly_k141_195627_6
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

comp(4212..4736)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YHN1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
S_p2_S4_coassembly_k141_195627_7
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

4927..5202
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YWW9_9BACT
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
S_p2_S4_coassembly_k141_195627_8
Pontibacillus chungwhensis, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5511..6788
DNA (1278bp) protein (426aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Pontibacillus.;" source="Pontibacillus chungwhensis BH030062.;"
hypothetical protein Tax=Thioalkalivibrio sp. ALE16 RepID=UPI000363B78A
histidine kinase
S_p2_S4_coassembly_k141_195627_9
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

6808..7914
DNA (1107bp) protein (369aa)
Response regulator receiver modulated metal dependent phosphohydrolase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFV9_CHLTF
response regulator receiver modulated metal dependent phosphohydrolase
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:AEP11753.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
S_p2_S4_coassembly_k141_195627_10
unknown

Not on your lists

comp(7936..8124)
DNA (189bp) protein (63aa)

This feature has no annotations

S_p2_S4_coassembly_k141_195627_11
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8333..9313
DNA (981bp) protein (327aa)
TPR repeat-containing protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FLT6_DESAA
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACL05440.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
S_p2_S4_coassembly_k141_195627_12
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

9374..9844
DNA (471bp) protein (157aa)
Phosphohistidine phosphatase, SixA Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MBE9_CALMQ
phosphohistidine phosphatase SixA
Phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:ABW01239.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307; / IC-167).;"
S_p2_S4_coassembly_k141_195627_13
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

comp(10546..10746)
DNA (201bp) protein (67aa)
cold-shock protein Tax=Nitrospina RepID=UPI0003812FB5
cspE; DNA-binding transcriptional repressor
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
S_p2_S4_coassembly_k141_195627_14
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10941..13568
DNA (2628bp) protein (876aa)
Putative uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVC8_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:CAJ71178.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
hypothetical protein
S_p2_S4_coassembly_k141_195627_15
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

13628..14149
DNA (522bp) protein (174aa)
Peptidyl-prolyl cis-trans isomerase Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E5R9_METEZ
FKBP-type peptidylprolyl isomerase
Tax=CG_Pacearch_03
S_p2_S4_coassembly_k141_195627_16
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(14217..15359)
DNA (1143bp) protein (381aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1ZCT3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ91178.1}; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
hypothetical protein
S_p2_S4_coassembly_k141_195627_17
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(15469..16329)
DNA (861bp) protein (287aa)
Chemotaxis protein bin=GWB2_Nitrospirae_rel_47_37 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
chemotaxis protein
Tax=GWB2_Nitrospirae_47_37_curated
S_p2_S4_coassembly_k141_195627_18
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(16462..17340)
DNA (879bp) protein (293aa)
Lateral flagellar motor protein MotA bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
lateral flagellar motor protein MotA
Tax=GWB2_Nitrospirae_47_37_curated
S_p2_S4_coassembly_k141_195627_19
unknown

Not on your lists

comp(17356..17883)
DNA (528bp) protein (176aa)

This feature has no annotations

S_p2_S4_coassembly_k141_195627_20
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18193..19782
DNA (1590bp) protein (530aa)
TPR repeat-containing protein bin=GWA2_OP3_52_12 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
hypothetical protein
Tax=GWB2_Deltaproteobacteria_55_19_curated
S_p2_S4_coassembly_k141_195627_21
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

20018..20533
DNA (516bp) protein (172aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B06 RepID=UPI0003739797
tRNA methyltransferase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
S_p2_S4_coassembly_k141_195627_22
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

comp(20669..20827)
DNA (159bp) protein (53aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1ZA55_9BACT
toluene tolerance family protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
Displaying 22 items

View Taxonomy