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S_p2_S4_coassembly_k141_4139196

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_4139196_1
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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131..1033
DNA (903bp) protein (301aa)
hypothetical protein
NACHT domain protein {ECO:0000313|EMBL:AIO23735.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;"
S_p2_S4_coassembly_k141_4139196_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

1096..1422
DNA (327bp) protein (109aa)
hypothetical protein Tax=Methylomicrobium buryatense RepID=UPI0003464E3B
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
S_p2_S4_coassembly_k141_4139196_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

1419..1667
DNA (249bp) protein (83aa)
hypothetical protein Tax=Methylomicrobium buryatense RepID=UPI0003484A4B
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
S_p2_S4_coassembly_k141_4139196_4
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

2092..2853
DNA (762bp) protein (254aa)
Putative Iron-sulfur cluster assembly scaffold protein SufE Tax=Nitrospina gracilis 3/211 RepID=M1YV20_9BACT
nitrogen-fixing NifU domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
S_p2_S4_coassembly_k141_4139196_5
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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2879..4342
DNA (1464bp) protein (488aa)
Iron-sulfur cluster assembly protein SufB Tax=Nitrospina gracilis 3/211 RepID=M1YVK2_9BACT
Iron-sulfur cluster assembly protein SufB {ECO:0000313|EMBL:CCQ89340.1}; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
Iron-regulated ABC transporter membrane component SufB
S_p2_S4_coassembly_k141_4139196_6

Not on your lists

4532..5338
DNA (807bp) protein (269aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00037E95A3
FeS assembly ATPase SufC {ECO:0000313|EMBL:AIA13675.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FeS assembly ATPase SufC
S_p2_S4_coassembly_k141_4139196_7
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

5348..6673
DNA (1326bp) protein (442aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI0003608DBC
Putative Iron-sulfur cluster assembly protein SufD {ECO:0000313|EMBL:CCQ89338.1}; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
sufD; sufD
S_p2_S4_coassembly_k141_4139196_8
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

6666..7919
DNA (1254bp) protein (418aa)
cysteine desulfurase (EC:4.4.1.16)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI0003608D91
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
S_p2_S4_coassembly_k141_4139196_9
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

8134..8589
DNA (456bp) protein (152aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003711212
nifU-like protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
S_p2_S4_coassembly_k141_4139196_10
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

8647..9699
DNA (1053bp) protein (351aa)
Pyruvate formate-lyase activating enzyme {ECO:0000313|EMBL:CCQ89335.1}; EC=1.97.1.4 {ECO:0000313|EMBL:CCQ89335.1};; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase activating enzyme Tax=Nitrospina gracilis 3/211 RepID=M1YVJ7_9BACT
S_p2_S4_coassembly_k141_4139196_11
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

9787..10266
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YUR9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCQ89333.1}; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
flavin reductase domain-containing FMN-binding protein
S_p2_S4_coassembly_k141_4139196_12
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

comp(10450..10941)
DNA (492bp) protein (164aa)
UPF0234 protein NITGR_100037 Tax=Nitrospina gracilis 3/211 RepID=M1YFM1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
S_p2_S4_coassembly_k141_4139196_13
RLO_Nitrospinae_47_7, Nitrospirae, Bacteria

Not on your lists

11237..12271
DNA (1035bp) protein (345aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1Z8A2_9BACT
protein of unknown function TIGR00730
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_47_7_curated
S_p2_S4_coassembly_k141_4139196_14
RLO_PLX_64_10, Bacteria

Not on your lists

12355..12681
DNA (327bp) protein (109aa)
DNA polymerase beta domain protein region bin=GWC2_Syntrophobacterales_56_13 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
DNA polymerase beta domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S_p2_S4_coassembly_k141_4139196_15
RLO_PLX_64_10, Bacteria

Not on your lists

12681..13187
DNA (507bp) protein (169aa)
UPF0332 protein TM_1000 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S_p2_S4_coassembly_k141_4139196_16
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

13503..14273
DNA (771bp) protein (257aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI000375E075
family 2 glycosyl transferase
Tax=RBG_16_Planctomycetes_43_13_curated
S_p2_S4_coassembly_k141_4139196_17
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

14276..14674
DNA (399bp) protein (133aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI000365036C
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
S_p2_S4_coassembly_k141_4139196_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14671..15003
DNA (333bp) protein (111aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YUR2_9BACT
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_4139196_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15000..15821
DNA (822bp) protein (274aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037BB543
group 1 glycosyl transferase
Tax=CG_Woesearch_02
S_p2_S4_coassembly_k141_4139196_20
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15831..16526
DNA (696bp) protein (232aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI00038226C2
Uncharacterized protein {ECO:0000313|EMBL:KJS06496.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
S_p2_S4_coassembly_k141_4139196_21
GWC2_OP11_38_9_partial, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(16573..17451)
DNA (879bp) protein (293aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037FB0C5
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:KKQ89830.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWC2_38_9.;"
putative nucleoside-diphosphate sugar epimerase
S_p2_S4_coassembly_k141_4139196_22
GWA2_OD1_38_13, Parcubacteria, Bacteria

Not on your lists

comp(17465..18208)
DNA (744bp) protein (248aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI00036C4442
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKQ57723.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_13.;"
family 2 glycosyl transferase
S_p2_S4_coassembly_k141_4139196_23
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

18496..20070
DNA (1575bp) protein (525aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003805F8F
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
S_p2_S4_coassembly_k141_4139196_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20076..20633
DNA (558bp) protein (186aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI00036BFF1B
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADB52127.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 24 items

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