ggKbase home page

S_p2_S4_coassembly_k141_144250

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_144250_1
unknown

Not on your lists

comp(71..211)
DNA (141bp) protein (47aa)

This feature has no annotations

S_p2_S4_coassembly_k141_144250_2
unknown

Not on your lists

546..683
DNA (138bp) protein (46aa)

This feature has no annotations

S_p2_S4_coassembly_k141_144250_3

Not on your lists

comp(722..1093)
DNA (372bp) protein (124aa)
id=5047509 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45718.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
S_p2_S4_coassembly_k141_144250_4
unknown

Not on your lists

comp(1117..2112)
DNA (996bp) protein (332aa)

This feature has no annotations

S_p2_S4_coassembly_k141_144250_5
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

2293..2898
DNA (606bp) protein (202aa)
superoxide dismutase, Fe-Mn family (EC:1.15.1.1)
Superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S_p2_S4_coassembly_k141_144250_6
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2974..3138)
DNA (165bp) protein (55aa)
Uncharacterized protein Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6F3_METEZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI73175.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
S_p2_S4_coassembly_k141_144250_7

Not on your lists

comp(3145..3579)
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52764.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
id=5799548 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
S_p2_S4_coassembly_k141_144250_8
unknown

Not on your lists

comp(3579..4253)
DNA (675bp) protein (225aa)
Glutamate--tRNA ligase bin=GWF2_Planctomycetes_50_10 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
S_p2_S4_coassembly_k141_144250_9
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

4302..4781
DNA (480bp) protein (160aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
S_p2_S4_coassembly_k141_144250_10
unknown

Not on your lists

comp(4802..5470)
DNA (669bp) protein (223aa)

This feature has no annotations

S_p2_S4_coassembly_k141_144250_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5544..6611
DNA (1068bp) protein (356aa)
putative hemolysin bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
S_p2_S4_coassembly_k141_144250_12
unknown

Not on your lists

6673..6936
DNA (264bp) protein (88aa)

This feature has no annotations

S_p2_S4_coassembly_k141_144250_13

Not on your lists


comp(6947..7657)
DNA (711bp) protein (237aa)
dph2; 2-(3-amino-3-carboxypropyl)histidine synthase (EC:2.5.1.108)
Diphthamide synthase subunit {ECO:0000313|EMBL:KHO51464.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein; K07561 diphthamide synthase subunit DPH2 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S_p2_S4_coassembly_k141_144250_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

7900..9822
DNA (1923bp) protein (641aa)
integral membrane transport protein bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
amino acid permease-associated protein
Tax=AR11
S_p2_S4_coassembly_k141_144250_15
Crassostrea gigas, Crassostrea, Ostreoida, Pteriomorphia, Mollusca, Metazoa

Not on your lists

comp(9844..10950)
DNA (1107bp) protein (369aa)
Hemicentin-1 Tax=Crassostrea gigas RepID=K1QUP4_CRAGI
Hemicentin-1 {ECO:0000313|EMBL:EKC34990.1}; species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;"
putative protease
S_p2_S4_coassembly_k141_144250_16
Bacteriovorax sp. BAL6_X, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10934..11923)
DNA (990bp) protein (330aa)
Endosialidase chaperone Tax=Bacteriovorax sp. BAL6_X RepID=T0C7G3_9DELT
Endosialidase chaperone {ECO:0000313|EMBL:EPZ52163.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BAL6_X.;"
cell wall anchor protein
S_p2_S4_coassembly_k141_144250_17
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(11910..12827)
DNA (918bp) protein (306aa)
Tax=CG_Woesearch_01
S_p2_S4_coassembly_k141_144250_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12829..13329)
DNA (501bp) protein (167aa)
id=5045328 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
S_p2_S4_coassembly_k141_144250_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13307..13780)
DNA (474bp) protein (158aa)
id=5045329 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
S_p2_S4_coassembly_k141_144250_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13848..14450)
DNA (603bp) protein (201aa)
Putative uncharacterized protein bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=AR11
S_p2_S4_coassembly_k141_144250_21

Not on your lists

comp(14425..15186)
DNA (762bp) protein (254aa)
id=5046296 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46097.1}; species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S_p2_S4_coassembly_k141_144250_22
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(15235..15738)
DNA (504bp) protein (168aa)
hypothetical protein bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
S_p2_S4_coassembly_k141_144250_23
unknown

Not on your lists

15902..16699
DNA (798bp) protein (266aa)

This feature has no annotations

S_p2_S4_coassembly_k141_144250_24

Not on your lists


16753..18843
DNA (2091bp) protein (697aa)
protein containing C-terminal region/beta chain of methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase, class Ia {ECO:0000313|EMBL:KHO52762.1}; species="Archaea.;" source="archaeon GW2011_AR11.;"
Methionine--tRNA ligase bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S_p2_S4_coassembly_k141_144250_25
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

18853..19059
DNA (207bp) protein (69aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003680DED
Tax=AR11
S_p2_S4_coassembly_k141_144250_26

Not on your lists

19114..19707
DNA (594bp) protein (198aa)
Cell wall surface anchor family protein {ECO:0000313|EMBL:KHO55611.1}; species="Archaea.;" source="archaeon GW2011_AR21.;"
S_p2_S4_coassembly_k141_144250_27
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

19769..20338
DNA (570bp) protein (190aa)
Iron-sulfur cluster assembly accessory protein Tax=Waddlia chondrophila RepID=D6YW49_WADCW bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Iron-sulfur cluster assembly accessory protein
Tax=AR11
S_p2_S4_coassembly_k141_144250_28
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

Not on your lists

20389..20868
DNA (480bp) protein (160aa)
Bacterioferritin {ECO:0000313|EMBL:KKU99853.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
Bacterioferritin bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
bacterioferritin
S_p2_S4_coassembly_k141_144250_29
unknown

Not on your lists

comp(20878..21102)
DNA (225bp) protein (75aa)

This feature has no annotations

S_p2_S4_coassembly_k141_144250_30
unknown

Not on your lists

comp(21107..21409)
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

View Taxonomy