ggKbase home page

S_p2_S4_coassembly_k141_3014769

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_3014769_1
unknown

Not on your lists

2..514
DNA (513bp) protein (171aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3014769_2

Not on your lists

587..1120
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51714.1}; species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S_p2_S4_coassembly_k141_3014769_3

Not on your lists

1117..1551
DNA (435bp) protein (145aa)
coiled-coil bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47030.1}; species="Archaea.;" source="archaeon GW2011_AR4.;"
S_p2_S4_coassembly_k141_3014769_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

1553..2680
DNA (1128bp) protein (376aa)
ATP-utilizing enzymes of ATP-grasp superfamily (Probably carboligase) Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T917_9EURY
5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase
Tax=AR11
S_p2_S4_coassembly_k141_3014769_5
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

2682..4220
DNA (1539bp) protein (513aa)
rmr:Rmar_0677 GMP synthase, large subunit; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
guaA; GMP synthase (EC:6.3.5.2)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
S_p2_S4_coassembly_k141_3014769_6
unknown

Not on your lists

4262..4414
DNA (153bp) protein (51aa)

This feature has no annotations

S_p2_S4_coassembly_k141_3014769_7
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4416..4610
DNA (195bp) protein (65aa)
Cold shock DNA binding domain protein Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BUS9_METCG
cold shock DNA binding domain-containing protein
Cold shock DNA binding domain protein {ECO:0000313|EMBL:AEB68319.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
S_p2_S4_coassembly_k141_3014769_8

Not on your lists

comp(4617..6155)
DNA (1539bp) protein (513aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; species="Archaea.;" source="archaeon GW2011_AR11.;"
phosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
amidophosphoribosyltransferase (EC:2.4.2.14)
S_p2_S4_coassembly_k141_3014769_9
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6280..6597
DNA (318bp) protein (106aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LR97_SYNAS
Tax=CG_Delta_05
S_p2_S4_coassembly_k141_3014769_10
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6730..7608
DNA (879bp) protein (293aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCADC.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LR97_SYNAS
S_p2_S4_coassembly_k141_3014769_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

7658..8362
DNA (705bp) protein (235aa)
id=5048867 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S_p2_S4_coassembly_k141_3014769_12
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

8408..8962
DNA (555bp) protein (185aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U3A1_9EURY
5-formyltetrahydrofolate cyclo-ligase {ECO:0000313|EMBL:EMR73395.1}; species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
S_p2_S4_coassembly_k141_3014769_trna_1
unknown

Not on your lists

comp(8967..9067)
DNA (101bp)
transferRNA Gly
Displaying 13 items

View Taxonomy