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S5_GD2017_2_S2_scaffold_4819

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S5_GD2017_2_S2_scaffold_4819_1
RLO_OD1_Giovannonibacteria_44_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..832)
DNA (831bp) protein (277aa)
Metalloendopeptidase PepO Tax=Melioribacter roseus (strain P3M) RepID=I7A2J7_MELRP
peptidase M13
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_44_32_curated
S5_GD2017_2_S2_scaffold_4819_2
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

comp(840..1310)
DNA (471bp) protein (157aa)
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
S5_GD2017_2_S2_scaffold_4819_3
unknown

Not on your lists

1367..1582
DNA (216bp) protein (72aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_4819_4
R_OD1_Nomurabacteria_33_24, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1693..3162)
DNA (1470bp) protein (490aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C5D03
lysyl-tRNA synthetase
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_33_24_curated
S5_GD2017_2_S2_scaffold_4819_5
R_OD1_Kaiserbacteria_51_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3174..3641)
DNA (468bp) protein (156aa)
Transcription elongation factor GreA bin=GWA2_OP3_53_43 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
transcription elongation factor GreA
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_51_21_curated
S5_GD2017_2_S2_scaffold_4819_6
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(3691..4560)
DNA (870bp) protein (290aa)
Tagatose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] bin=OD1_GWC2_34_28 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tagatose-bisphosphate aldolase
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
S5_GD2017_2_S2_scaffold_4819_7
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4648..5640
DNA (993bp) protein (331aa)
carbohydrate kinase PfkB; K00852 ribokinase [EC:2.7.1.15] bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative Ribokinase (EC:2.7.1.15)
Tax=CG_Nomura_04
S5_GD2017_2_S2_scaffold_4819_8
unknown

Not on your lists

comp(5686..5946)
DNA (261bp) protein (87aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_4819_trna_1
unknown

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comp(6237..6320)
DNA (84bp)
transferRNA Tyr
S5_GD2017_2_S2_scaffold_4819_9
RIFOXYC1_FULL_RIF_OD1_09_52_10_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(6402..9101)
DNA (2700bp) protein (900aa)
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB bin=OD1_GWC2_34_28 species=uncultured bacterium CSLC2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ATP-dependent chaperone ClpB
Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated
S5_GD2017_2_S2_scaffold_4819_10
unknown

Not on your lists

comp(9190..9624)
DNA (435bp) protein (145aa)

This feature has no annotations

S5_GD2017_2_S2_scaffold_4819_11
R_RIF_OD1_11_45_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9637..10272)
DNA (636bp) protein (212aa)
id=5803530 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Zn-dependent hydrolase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_45_35_curated
Displaying 12 items

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