ggKbase home page

S35_SO-1_scaffold_189202

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_189202_1
unknown

Not on your lists

1..531
DNA (531bp) protein (177aa)

This feature has no annotations

S35_SO-1_scaffold_189202_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(544..1617)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820E23
ribosomal protein S6 modification protein
Tax=AR11
S35_SO-1_scaffold_189202_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1872..2213)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003763F0C
metalloprotease
Tax=AR11
S35_SO-1_scaffold_189202_4

Not on your lists

comp(2269..2658)
DNA (390bp) protein (130aa)
Putative nickel-responsive regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TTH6_9EURY
Marine sediment metagenome DNA, contig: S06H3_S04204 {ECO:0000313|EMBL:GAI22947.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nickel responsive regulator NikR
S35_SO-1_scaffold_189202_5

Not on your lists

2765..3427
DNA (663bp) protein (221aa)
high-affinity nickel-transporter id=5045818 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
High-affinity nickel-transporter {ECO:0000313|EMBL:KHO46431.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
high-affinity nickel-transporter
S35_SO-1_scaffold_189202_6
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

3429..4235
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000379B491
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
S35_SO-1_scaffold_189202_7
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

4237..4791
DNA (555bp) protein (185aa)
Uncharacterized protein id=4541122 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
S35_SO-1_scaffold_189202_8
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4800..5540
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J0U5_DESRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO48698.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
S35_SO-1_scaffold_189202_9
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

5723..6883
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003753BA4
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
S35_SO-1_scaffold_189202_10
R_OP11_Levybacteria_39_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

6980..7678
DNA (699bp) protein (233aa)
Tax=RIFCSPLOWO2_01_FULL_OP11_Levybacteria_39_10_curated
S35_SO-1_scaffold_189202_11

Not on your lists

comp(7715..8263)
DNA (549bp) protein (183aa)
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5043637 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Displaying 11 items

View Taxonomy