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S36_SO-2_scaffold_181366

Search features with annotation key words

Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_181366_1
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(34..528)
DNA (495bp) protein (165aa)
Transposase, IS200 family n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BYM8_METCG
transposase, IS200 family
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S36_SO-2_scaffold_181366_2
unknown

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1150..1374
DNA (225bp) protein (75aa)

This feature has no annotations

S36_SO-2_scaffold_181366_3
unknown

Not on your lists

1371..1958
DNA (588bp) protein (196aa)

This feature has no annotations

S36_SO-2_scaffold_181366_4
unknown

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1958..2824
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Aliivibrio fischeri RepID=Q9ALI4_ALIFS
S36_SO-2_scaffold_181366_5
unknown

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2824..3156
DNA (333bp) protein (111aa)

This feature has no annotations

S36_SO-2_scaffold_181366_6
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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3153..3434
DNA (282bp) protein (94aa)
hypothetical protein id=5802631 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
prophage antirepressor
Tax=CG_Aenigma_01
S36_SO-2_scaffold_181366_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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3469..3945
DNA (477bp) protein (159aa)
hypothetical protein id=5043706 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Aenigma_01
S36_SO-2_scaffold_181366_trna_1
unknown

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4213..4314
DNA (102bp)
transferRNA Cys
S36_SO-2_scaffold_181366_8
unknown

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4603..5343
DNA (741bp) protein (247aa)

This feature has no annotations

S36_SO-2_scaffold_181366_9
unknown

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5409..5621
DNA (213bp) protein (71aa)

This feature has no annotations

S36_SO-2_scaffold_181366_10
AR11, Woesearchaeaota, DPANN, Archaea

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5631..6377
DNA (747bp) protein (249aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] id=5046750 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA(1-methyladenosine) methyltransferase
Tax=AR11
S36_SO-2_scaffold_181366_11
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6436..7455
DNA (1020bp) protein (340aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DET7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ80219.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
inositol monophosphatase
S36_SO-2_scaffold_181366_12
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

7466..8434
DNA (969bp) protein (323aa)
homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000313|EMBL:AAL95118.1}; EC=2.7.1.39 {ECO:0000313|EMBL:AAL95118.1};; TaxID=190304 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP; 101130 / JCM 8532 / LMG 13131).;"
Uncharacterized protein n=1 Tax=Fusobacterium nucleatum CTI-2 RepID=U7TDX9_FUSNU
S36_SO-2_scaffold_181366_13
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8595..9413)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3S9_9CLOT
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
S36_SO-2_scaffold_181366_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9461..11209)
DNA (1749bp) protein (583aa)
ABC transporter; K09686 antibiotic transport system permease protein id=5041890 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ABC-2 type transporter
Tax=AR4
S36_SO-2_scaffold_181366_15

Not on your lists

comp(11206..11928)
DNA (723bp) protein (241aa)
ABC-type multidrug transport system, ATP-ase compoment CAC0241 n=2 Tax=Clostridium RepID=A0PYE1_CLONN id=5103647 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC-type multidrug transport system, ATP-ase compoment
ABC-type multidrug transport system, ATP-ase compoment {ECO:0000313|EMBL:AJF62928.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S36_SO-2_scaffold_181366_16
R_WOR_2_52_10, WOR-2, Bacteria

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12034..12738
DNA (705bp) protein (235aa)
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress id=5799610 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
folate-binding protein
Tax=RIFCSPHIGHO2_01_FULL_WOR_2_52_10_curated
S36_SO-2_scaffold_181366_17

Not on your lists

comp(12762..13571)
DNA (810bp) protein (270aa)
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46833.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S36_SO-2_scaffold_181366_18
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(13709..14821)
DNA (1113bp) protein (371aa)
isopentenyl pyrophosphate isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1).;"
Isopentenyl-diphosphate delta-isomerase n=2 Tax=Pyrococcus furiosus RepID=A6YQV2_PYRFU
S36_SO-2_scaffold_181366_19
Staphylococcus sp. EGD-HP3, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14814..15986)
DNA (1173bp) protein (391aa)
phosphomevalonate kinase (EC:2.7.4.2)
Phosphomevalonate kinase n=2 Tax=Staphylococcus RepID=K0TRX3_9STAP
Phosphomevalonate kinase {ECO:0000313|EMBL:ERF49149.1}; TaxID=1357269 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. EGD-HP3.;"
S36_SO-2_scaffold_181366_20

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comp(15986..17005)
DNA (1020bp) protein (340aa)
diphosphomevalonate decarboxylase (EC:4.1.1.33)
mevalonate diphosphate decarboxylase; K01597 diphosphomevalonate decarboxylase [EC:4.1.1.33] id=5241527 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:AJF60518.1}; EC=4.1.1.33 {ECO:0000313|EMBL:AJF60518.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
S36_SO-2_scaffold_181366_21
GWE2_TM6_31_21, TM6, Bacteria

Not on your lists

comp(17002..17928)
DNA (927bp) protein (309aa)
mvk; mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TEC6_9EURY
Mevalonate kinase {ECO:0000313|EMBL:KKP26041.1}; TaxID=1619073 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWE2_31_21.;"
S36_SO-2_scaffold_181366_22
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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comp(17952..18422)
DNA (471bp) protein (157aa)
hypothetical protein id=8267535 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_13_Aminicenantes_59_9_curated
S36_SO-2_scaffold_181366_23
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(18373..19530)
DNA (1158bp) protein (386aa)
Acetyl-CoA acetyltransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKD8_METZD
acetyl-CoA acetyltransferase
Thiolase {ECO:0000313|EMBL:ADE35700.1}; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalophilus.;" source="Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).;"
S36_SO-2_scaffold_181366_24

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comp(19530..20585)
DNA (1056bp) protein (352aa)
UPF0219 protein BSM_22350/BSM_33410 n=1 Tax=uncultured archaeon RepID=D1J9H8_9ARCH
UPF0219 protein BSM_22350 {ECO:0000256|HAMAP-Rule:MF_01409}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
S36_SO-2_scaffold_181366_25
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20582..21898)
DNA (1317bp) protein (439aa)
Hydroxymethylglutaryl-CoA reductase {ECO:0000313|EMBL:EMS74112.1}; EC=1.1.1.34 {ECO:0000313|EMBL:EMS74112.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Hydroxymethylglutaryl-CoA reductase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FQI7_9CLOT
3-hydroxy-3-methylglutaryl-CoA reductase
S36_SO-2_scaffold_181366_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22177..24237)
DNA (2061bp) protein (687aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
potassium transporter n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI0003797889
Tax=AR11
S36_SO-2_scaffold_181366_27
unknown

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comp(24268..24501)
DNA (234bp) protein (78aa)

This feature has no annotations

S36_SO-2_scaffold_181366_28
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

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24628..25059
DNA (432bp) protein (144aa)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
S36_SO-2_scaffold_181366_29

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comp(25071..25685)
DNA (615bp) protein (205aa)
V-type ATPase subunit D; K02120 V-type H+-transporting ATPase subunit D [EC:3.6.3.14] id=5044036 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
atpD; V-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Displaying items 1-30 of 60 in total

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