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S36_SO-2_scaffold_628884

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_628884_1
unknown

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comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

S36_SO-2_scaffold_628884_2
CG_Pacearch_04, Pacearchaeota, Archaea

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161..373
DNA (213bp) protein (71aa)
transcription factor CBF/NF-Y/histone domain-containing protein id=5041813 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
archaeal histone
Tax=CG_Pacearch_04
S36_SO-2_scaffold_628884_3
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(569..1480)
DNA (912bp) protein (304aa)
rnz; ribonuclease Z Rnz (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5046343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNAse Z
Tax=CG_Pacearch_04
S36_SO-2_scaffold_628884_4
CG_Woesearch_02, Woesearchaeota, Archaea

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1541..2074
DNA (534bp) protein (178aa)
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5046344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-intron endonuclease
Tax=CG_Woesearch_02
S36_SO-2_scaffold_628884_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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2110..3042
DNA (933bp) protein (311aa)
Putative uncharacterized protein id=5800109 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S36_SO-2_scaffold_628884_6
unknown

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3062..3739
DNA (678bp) protein (226aa)

This feature has no annotations

S36_SO-2_scaffold_628884_7
CG_Woesearch_02, Woesearchaeota, Archaea

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3755..4786
DNA (1032bp) protein (344aa)
flap structure-specific endonuclease; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5041809 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
flap endonuclease-1 (EC:3.-.-.-)
Tax=CG_Woesearch_02
S36_SO-2_scaffold_628884_8
unknown

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4817..5308
DNA (492bp) protein (164aa)

This feature has no annotations

S36_SO-2_scaffold_628884_9
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5381..6256
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKX7_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG72833.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
S36_SO-2_scaffold_628884_10
AR15, Woesearchaeaota, DPANN, Archaea

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6290..7303
DNA (1014bp) protein (338aa)
Met-10+ protein id=5800111 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
S36_SO-2_scaffold_628884_11
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7304..7741)
DNA (438bp) protein (146aa)
UPI0003D1AD78 related cluster n=1 Tax=unknown RepID=UPI0003D1AD78
Potassium channel protein {ECO:0000313|EMBL:AKB18308.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
Potassium channel protein
S36_SO-2_scaffold_628884_12
unknown

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comp(7793..8146)
DNA (354bp) protein (118aa)

This feature has no annotations

S36_SO-2_scaffold_628884_13

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8242..9012
DNA (771bp) protein (257aa)
transcriptional regulator TrmB id=5047425 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcriptional regulator TrmB {ECO:0000313|EMBL:KHO45243.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
transcriptional regulator TrmB
S36_SO-2_scaffold_628884_14
unknown

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9100..9291
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 14 items

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