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S36_SO-2_scaffold_126162

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S36_SO-2_scaffold_126162_1
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(634..1695)
DNA (1062bp) protein (354aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase id=4700305 bin=GWA2_Ignavibacteria-rel_35_8 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=BJP_IG2158_Nitrospirales_45_240
S36_SO-2_scaffold_126162_2
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2155..2604)
DNA (450bp) protein (150aa)
Phosphoesterase PA-phosphatase related protein id=4383675 bin=GWC2_Planctomycete_KSU_39_26 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S36_SO-2_scaffold_126162_3
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists


2658..4622
DNA (1965bp) protein (655aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=7201944 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
methionyl-tRNA synthetase
Tax=RBG_16_Micrarchaeota_49_10_curated
S36_SO-2_scaffold_126162_4

Not on your lists

4910..5449
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS53541.1}; TaxID=1618822 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_28.;"
Putative uncharacterized protein id=2195632 bin=GWB2_Geobacter-like_52_12 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
S36_SO-2_scaffold_126162_5
unknown

Not on your lists

comp(5759..6460)
DNA (702bp) protein (234aa)

This feature has no annotations

S36_SO-2_scaffold_126162_6
unknown

Not on your lists

comp(6533..6712)
DNA (180bp) protein (60aa)

This feature has no annotations

S36_SO-2_scaffold_126162_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(6742..6960)
DNA (219bp) protein (73aa)
similar to Probable 60S ribosomal protein L37-A; K02922 large subunit ribosomal protein L37e id=18248262 bin=AR5_curated_draft species=Clonorchis sinensis genus=Clonorchis taxon_order=Opisthorchiida taxon_class=Trematoda phylum=Platyhelminthes tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
50S ribosomal protein L37e
Tax=AR5
S36_SO-2_scaffold_126162_8
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(7347..7571)
DNA (225bp) protein (75aa)
Small nuclear ribonucleoprotein, LSM family; K04796 small nuclear ribonucleoprotein id=18248263 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Small nuclear ribonucleoprotein, LSM family
Tax=AR5
S36_SO-2_scaffold_126162_9
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

7685..8128
DNA (444bp) protein (148aa)
SSU ribosomal protein s8e; K02995 small subunit ribosomal protein S8e id=5044332 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
30S ribosomal protein S8e
Tax=AR5
S36_SO-2_scaffold_126162_10
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

8383..9447
DNA (1065bp) protein (355aa)
cax; calcium/proton exchanger; K07300 Ca2+:H+ antiporter id=5043680 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
calcium/proton exchanger Cax
Tax=RBG_13_Euryarchaeota_31_8_curated
S36_SO-2_scaffold_126162_11
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

9469..10404
DNA (936bp) protein (312aa)
mpi:Mpet_1125 hypothetical protein; K09799 hypothetical protein id=43128 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RBG_16_OP11_39_9b_curated
S36_SO-2_scaffold_126162_12
unknown

Not on your lists

10439..10726
DNA (288bp) protein (96aa)

This feature has no annotations

S36_SO-2_scaffold_126162_13
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

11116..11502
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S381_FERPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC64714.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
S36_SO-2_scaffold_126162_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

11507..12025
DNA (519bp) protein (173aa)
ArsR family transcriptional regulator id=18248267 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ArsR family transcriptional regulator
Tax=AR5
S36_SO-2_scaffold_126162_15
unknown

Not on your lists

comp(12026..12280)
DNA (255bp) protein (85aa)

This feature has no annotations

S36_SO-2_scaffold_126162_16
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

12400..13158
DNA (759bp) protein (253aa)
Hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-] id=18248276 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Hydrolase, TatD family
Tax=AR5
S36_SO-2_scaffold_126162_17
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13468..13896
DNA (429bp) protein (143aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
Ribonuclease VapC n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WP02_METH6
hypothetical protein
S36_SO-2_scaffold_126162_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13974..15116)
DNA (1143bp) protein (381aa)
aatA; aspartate aminotransferase A (AspAT) (EC:2.6.1.1)
Aspartate aminotransferase id=1913282 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
S36_SO-2_scaffold_126162_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

15159..16625
DNA (1467bp) protein (489aa)
phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase id=5799881 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
S36_SO-2_scaffold_126162_20
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16740..18245
DNA (1506bp) protein (502aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=697286 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus larvae subsp. larvae DSM 25719.;"
pyk; Pyk (EC:2.7.1.40)
pyruvate kinase n=1 Tax=Laceyella sacchari RepID=UPI0003B5ECA1
S36_SO-2_scaffold_126162_21
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18275..19120)
DNA (846bp) protein (282aa)
Putative hydrolase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7A9_MYXSD
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:AGC43735.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
S36_SO-2_scaffold_126162_22
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

19215..20057
DNA (843bp) protein (281aa)
Histone deacetylase superfamily id=4705374 bin=GWC2_OP3_44_8 species=Methanotorris igneus genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
histone deacetylase superfamily protein
Tax=GWF2_WOR_2_43_52_curated
S36_SO-2_scaffold_126162_23

Not on your lists

20106..20327
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50117.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Uncharacterized protein id=4379348 bin=PER_GWC2_41_7 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
S36_SO-2_scaffold_126162_24
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

20320..20682
DNA (363bp) protein (121aa)
Putative PIN domain protein id=4379347 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PIN protein
Tax=AR9
S36_SO-2_scaffold_126162_25
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(20693..20992)
DNA (300bp) protein (100aa)
Transcription regulator, PadR-like family n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A1H5_THESM
Transcription regulator, PadR-like family
Transcription regulator, PadR-like family {ECO:0000313|EMBL:ACS89470.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strain MM 739 / DSM 12597).;"
S36_SO-2_scaffold_126162_26
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

21047..22120
DNA (1074bp) protein (358aa)
Myo-inositol-1-phosphate synthase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4I3_SPHTD
Myo-inositol-1-phosphate synthase
Tax=RBG_16_Archaea_50_20_curated
S36_SO-2_scaffold_126162_27
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(22134..22595)
DNA (462bp) protein (154aa)
GNAT family acetyltransferase n=1 Tax=uncultured marine crenarchaeote E37-7F RepID=G9BAR2_9CREN
conserved hypothetical protein, putative acetyltransferase/transglutaminase
Tax=RBG_16_RIF03_38_11_curated
S36_SO-2_scaffold_126162_28

Not on your lists

comp(22854..24065)
DNA (1212bp) protein (404aa)
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 id=5044348 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Peptide chain release factor subunit 1 {ECO:0000313|EMBL:KHO48283.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
peptide chain release factor 1
S36_SO-2_scaffold_126162_29
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

24218..25189
DNA (972bp) protein (324aa)
Band 7 protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNB1_ROSCS
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:ABU59044.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
S36_SO-2_scaffold_126162_30
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists


comp(25476..27866)
DNA (2391bp) protein (797aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=18248281 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
valyl tRNA-synthetase (EC:6.1.1.9)
Tax=AR5
Displaying items 1-30 of 65 in total

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