Alias: ACD1_908.67947.94
| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
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ACD1_3_31
uncultured bacterium, Bacteria
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Not on your lists |
34355..34549
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coiled-coil (db=Coil db_id=coil from=16 to=37 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE16439.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD1_3_32
uncultured bacterium, Bacteria
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Not on your lists |
34536..36143
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seg (db=Seg db_id=seg from=11 to=24)
Uncharacterized protein {ECO:0000313|EMBL:EKE25787.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD1_3_33
GWC1_OD1_38_22, Parcubacteria, Bacteria
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Not on your lists |
comp(36380..36826)
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hypothetical protein
Ferritin-like (db=superfamily db_id=SSF47240 from=5 to=144 evalue=5.6e-06 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation reduction (GO:0055114))
hypothetical protein alias=ACD1_C00003G00033,ACD1_908.67947.94G0033,ACD1_908.67947.94_33 id=16425 tax=ACD1 species=Dehalococcoides sp. VS genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
Putative uncharacterized protein Tax=GWC1_OD1_38_22
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ACD1_3_34
uncultured bacterium, Bacteria
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Not on your lists |
37041..38477
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coiled-coil (db=Coil db_id=coil from=50 to=71 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE12092.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD1_3_35
uncultured bacterium, Bacteria
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Not on your lists |
38547..39674
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alanine racemase
seg (db=Seg db_id=seg from=326 to=338)
ALANINE_RACEMASE (db=PatternScan db_id=PS00395 from=31 to=41 evalue=0.0 interpro_id=IPR020622 interpro_description=Alanine racemase, pyridoxal-phosphate attachment site GO=Biological Process: alanine metabolic process (GO:0006522), Molecular Function: alanine racemase activity (GO:0008784))
alr: alanine racemase (db=HMMTigr db_id=TIGR00492 from=3 to=375 evalue=5.0e-66 interpro_id=IPR000821 interpro_description=Alanine racemase GO=Biological Process: alanine metabolic process (GO:0006522), Molecular Function: alanine racemase activity (GO:0008784))
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ACD1_3_36
GWC1_OD1_38_22, Parcubacteria, Bacteria
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Not on your lists |
39694..41478
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Oligoendopeptidase F
Oligoendopeptidase F
Oligoendopeptidase, pepF/M3 family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFN0_SYNFM (db=UNIREF evalue=3.0e-122 bit_score=442.0 identity=39.49 coverage=96.8067226890756)
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=3 to=579 evalue=4.7e-95)
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ACD1_3_37
uncultured bacterium, Bacteria
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Not on your lists |
41682..42287
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ECF subfamily RNA polymerase sigma factor
SIGMA70_ECF (db=PatternScan db_id=PS01063 from=59 to=90 evalue=0.0 interpro_id=IPR000838 interpro_description=RNA polymerase sigma factor 70, ECF, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=31 to=194 evalue=3.1e-44 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=10 to=126 evalue=1.2e-19 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
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ACD1_3_38
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria
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Not on your lists |
42315..43061
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hypothetical protein (db=KEGG evalue=1.0e-08 bit_score=63.9 identity=28.22 coverage=64.6586345381526)
transmembrane_regions (db=TMHMM db_id=tmhmm from=118 to=140)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
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ACD1_3_39
GWC1_OD1_36_108, Parcubacteria, Bacteria
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Not on your lists |
comp(43275..44450)
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tRNA sulfurtransferase
TIGR00342: thiamine biosynthesis/tRNA modif (db=HMMTigr db_id=TIGR00342 from=6 to=381 evalue=1.1e-116 interpro_id=IPR003720 interpro_description=Thiamine biosynthesis protein GO=Molecular Function: RNA binding (GO:0003723), Cellular Component: cytoplasm (GO:0005737), Biological Process: thiamin biosynthetic process (GO:0009228))
ThiI (db=HMMPfam db_id=PF02568 from=181 to=374 evalue=9.5e-70 interpro_id=IPR020536 interpro_description=Thiamine biosynthesis protein, C-terminal GO=Molecular Function: RNA binding (GO:0003723), Cellular Component: cytoplasm (GO:0005737), Biological Process: thiamin biosynthetic process (GO:0009228))
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=179 to=391 evalue=4.2e-51)
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ACD1_3_40
uncultured bacterium, Bacteria
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Not on your lists |
44651..45703
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GTP-binding protein YchF
GTP-binding protein YchF
GTP-binding protein YchF n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QKJ3_CATAD (db=UNIREF evalue=5.0e-97 bit_score=358.0 identity=53.31 coverage=99.1452991452991)
coiled-coil (db=Coil db_id=coil from=134 to=155 evalue=NA)
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ACD1_3_41
GWE2_OD1_ACD1_35_20, Moranbacteria, Parcubacteria, Bacteria
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Not on your lists |
45874..46518
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paaX; repressor in ring oxydation complex/phenylacetic acid degradation pathway related protein (PaaX); K02616 phenylacetic acid degradation operon negative regulatory protein (db=KEGG evalue=7.0e-09 bit_score=63.9 identity=32.5 coverage=53.4883720930233)
seg (db=Seg db_id=seg from=64 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
seg (db=Seg db_id=seg from=45 to=63)
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ACD1_3_42
uncultured bacterium, Bacteria
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Not on your lists |
47941..48480
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Transcriptional regulator, TrmB n=1 Tax=Burkholderia sp. Ch1-1 RepID=D5NS62_9BURK (db=UNIREF evalue=6.0e-14 bit_score=80.1 identity=30.13 coverage=83.8888888888889)
regulatory protein IclR
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EKE15933.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD1_3_43
uncultured bacterium, Bacteria
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Not on your lists |
48602..49567
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multi-sensor signal transduction histidine kinase
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=52)
seg (db=Seg db_id=seg from=35 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
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ACD1_3_44
uncultured bacterium, Bacteria
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Not on your lists |
49598..49969
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response regulator receiver modulated diguanylate cyclase/phosphodiesterase
CheY-like (db=superfamily db_id=SSF52172 from=1 to=121 evalue=4.5e-32 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=2 to=116 evalue=1.4e-30 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=3 to=123 evalue=1.5e-27)
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ACD1_3_45
GWC1_OD1_36_108, Parcubacteria, Bacteria
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Not on your lists |
50017..51765
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secretion system protein E
secretion system protein E
Type II secretion system protein E n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT43_9BACT (db=UNIREF evalue=4.0e-144 bit_score=515.0 identity=47.53 coverage=95.0257289879931)
seg (db=Seg db_id=seg from=154 to=168)
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ACD1_3_46
GWD2_OD1_36_12, Moranbacteria, Parcubacteria, Bacteria
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Not on your lists |
51862..53085
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Type II secretion system protein
seg (db=Seg db_id=seg from=226 to=239)
seg (db=Seg db_id=seg from=177 to=194)
transmembrane_regions (db=TMHMM db_id=tmhmm from=173 to=195)
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ACD1_3_47
GWC1_OD1_38_22, Parcubacteria, Bacteria
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Not on your lists |
53168..54556
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=10 to=30 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
Cna protein B-type domain (db=superfamily db_id=SSF49478 from=155 to=228 evalue=0.0068 interpro_id=IPR008970 interpro_description=Collagen-binding surface protein Cna, B-type domain GO=Molecular Function: binding (GO:0005488))
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ACD1_3_48
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria
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Not on your lists |
54560..55168
|
seg (db=Seg db_id=seg from=46 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=7 to=30 evalue=0.0061 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:KKQ46439.1}; TaxID=1618698 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_82.;"
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ACD1_3_49
GWC1_OD1_38_22, Parcubacteria, Bacteria
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Not on your lists |
55173..56666
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seg (db=Seg db_id=seg from=473 to=484)
seg (db=Seg db_id=seg from=351 to=362)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Tax=GWC1_OD1_38_22
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ACD1_3_50
GWD2_OD1_38_11, Parcubacteria, Bacteria
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Not on your lists |
56824..57915
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hypothetical protein
Tfp pilus assembly protein, ATPase PilM (db=HMMPIR db_id=PIRSF019169 from=8 to=358 evalue=2.2e-77 interpro_id=IPR005883 interpro_description=Type IV pilus assembly protein PilM)
pilM: type IV pilus assembly protein PilM (db=HMMTigr db_id=TIGR01175 from=11 to=357 evalue=3.1e-50 interpro_id=IPR005883 interpro_description=Type IV pilus assembly protein PilM)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=187 to=355 evalue=5.0e-23)
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ACD1_3_51
GWC1_OD1_38_22, Parcubacteria, Bacteria
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Not on your lists |
57899..58459
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transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=49)
PilN (db=HMMPfam db_id=PF05137 from=7 to=154 evalue=2.6e-10 interpro_id=IPR007813 interpro_description=Fimbrial assembly)
Fimbrial assembly family protein {ECO:0000313|EMBL:KKQ63055.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
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ACD1_3_52
GWC1_OD1_36_108, Parcubacteria, Bacteria
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Not on your lists |
58535..59182
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transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=113 to=125)
Uncharacterized protein {ECO:0000313|EMBL:KKP90402.1}; TaxID=1618894 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_36_108.;"
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ACD1_3_53
GWC1_OD1_38_22, Parcubacteria, Bacteria
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Not on your lists |
59187..59510
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transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
Uncharacterized protein {ECO:0000313|EMBL:KKQ63053.1}; TaxID=1618897 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_22.;"
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ACD1_3_54
uncultured bacterium, Bacteria
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Not on your lists |
comp(60266..61564)
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von Willebrand factor A
VanW family protein n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G850_CHLAD (db=UNIREF evalue=9.0e-44 bit_score=181.0 identity=31.61 coverage=65.8198614318707)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=415 to=430)
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ACD1_3_55
GWC1_OD1_36_108, Parcubacteria, Bacteria
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Not on your lists |
comp(61682..62197)
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Small heat shock protein
Small heat shock protein n=3 Tax=candidate division TM7 RepID=UPI00016B2686 (db=UNIREF evalue=8.0e-17 bit_score=89.4 identity=47.37 coverage=65.6976744186046)
seg (db=Seg db_id=seg from=108 to=123)
HSP20-like chaperones (db=superfamily db_id=SSF49764 from=24 to=168 evalue=1.5e-31 interpro_id=IPR008978 interpro_description=HSP20-like chaperone)
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ACD1_3_56
GWC1_OD1_36_108, Parcubacteria, Bacteria
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Not on your lists |
comp(62303..62884)
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seg (db=Seg db_id=seg from=45 to=55)
seg (db=Seg db_id=seg from=13 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=162 to=184)
transmembrane_regions (db=TMHMM db_id=tmhmm from=136 to=158)
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ACD1_3_57
GWF2_OD1_34_56, Moranbacteria, Parcubacteria, Bacteria
|
Not on your lists |
comp(62929..65589)
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valyl-tRNA synthetase (EC:6.1.1.9)
valyl-tRNA synthetase (EC:6.1.1.9)
Valyl-tRNA synthetase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CY39_HALOH (db=UNIREF evalue=0.0 bit_score=726.0 identity=44.79 coverage=99.2108229988726)
coiled-coil (db=Coil db_id=coil from=861 to=882 evalue=NA)
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ACD1_3_58
GWD2_OD1_37_9, Moranbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(65737..66999)
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Putative glycoprotease GCP n=1 Tax=Turicibacter sp. PC909 RepID=D4W2A6_9FIRM (db=UNIREF evalue=3.0e-72 bit_score=276.0 identity=44.23 coverage=72.209026128266)
gcp; putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
seg (db=Seg db_id=seg from=382 to=390)
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ACD1_3_59
GWD2_OD1_36_12, Moranbacteria, Parcubacteria, Bacteria
|
Not on your lists |
67086..67826
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ECF subfamily RNA polymerase sigma-24 subunit
seg (db=Seg db_id=seg from=24 to=37)
SIGMA70_ECF (db=PatternScan db_id=PS01063 from=101 to=132 evalue=0.0 interpro_id=IPR000838 interpro_description=RNA polymerase sigma factor 70, ECF, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=74 to=238 evalue=1.7e-47 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
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