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ACD1_3_59

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: 67086..67826

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 193.0
  • Bit_score: 131
  • Evalue 2.50e-28
seg (db=Seg db_id=seg from=24 to=37) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
SIGMA70_ECF (db=PatternScan db_id=PS01063 from=101 to=132 evalue=0.0 interpro_id=IPR000838 interpro_description=RNA polymerase sigma factor 70, ECF, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

GWD2_OD1_36_12 → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGAAAGGAAAATGAAAAGTCTTGTAAGTACTTTTTCCAGCGCTAATGCTGGAGTTAATTCGGTCATTACTAAGCCGACAAAATCTTCCACTAAGCTCAGATCCAAGTCATTGAATGAACGCAAAAAAGCGAAATTTAAGGCTTCAGCTGAAAATATTTCAGAATACGCGAAATTGAGTGATATTGAGTTGATTGAAATCATCAATGTTGAAAATGATGAGGTTTATAGCGAACTATTTTCACGTTATCAGAAAAAGCTCTTAACTTATATTTTTCGACTTGTGGGCAGTAGGGAAGAGGCAGAGGATATCTTGCAAACTGTTTTCGCTAAAACTTTCAAAAATATAGATAAATTCGATAAGACCAGAAAGTTTTCTTCATGGATATACCGCATTGCGCACAATGAAGCAGTTAACTATCTGAAGCGCAAAAGCAAGCGCTATACATTTTCTTGGGATGAAATATCTACCAGCAAGGACAAGTTAGATAGCGCCTCAAATGATGAATTACCAGATGAGAAATGGATGCATGAGGAAATCGCTGATGATGTCAACAACGCAATTAAGGCGCTTCCGGAAAAATATCAGCAAGTTTTAAAGCTTAGATACTTTAAAGAACTTACATACGACGAAATAGCCGTTGCTATTAACAAACCGCTCAATACTGTCGGTACGCTAATAAATAGGGCTAAAAAGAAATTGCTCGAAGTTGCAATTAAGCAGGGAATGGGCAAACAATAA
PROTEIN sequence
Length: 247
MERKMKSLVSTFSSANAGVNSVITKPTKSSTKLRSKSLNERKKAKFKASAENISEYAKLSDIELIEIINVENDEVYSELFSRYQKKLLTYIFRLVGSREEAEDILQTVFAKTFKNIDKFDKTRKFSSWIYRIAHNEAVNYLKRKSKRYTFSWDEISTSKDKLDSASNDELPDEKWMHEEIADDVNNAIKALPEKYQQVLKLRYFKELTYDEIAVAINKPLNTVGTLINRAKKKLLEVAIKQGMGKQ*