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ACD1_19

Alias: ACD1_6936.5962.7

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD1_19_1
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

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comp(2..229)
DNA (228bp) protein (76aa)
2..229 - (rbs_motif=TAAA rbs_spacer=13bp)
ACD1_19_2
R_OD1_45_26, Parcubacteria, Bacteria

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comp(244..1134)
DNA (891bp) protein (297aa)
pyrF; orotidine 5'-phosphate decarboxylase
OMPDECASE (db=PatternScan db_id=PS00156 from=93 to=106 evalue=0.0 interpro_id=IPR018089 interpro_description=Orotidine 5'-phosphate decarboxylase, active site GO=Molecular Function: orotidine-5'-phosphate decarboxylase activity (GO:0004590), Biological Process: 'de novo' pyrimidine base biosynthetic process (GO:0006207))
pyrF_sub2: orotidine 5'-phosphate decarboxy (db=HMMTigr db_id=TIGR02127 from=1 to=290 evalue=3.7e-66 interpro_id=IPR011995 interpro_description=Orotidine 5'-phosphate decarboxylase, subfamily 2, core GO=Molecular Function: orotidine-5'-phosphate decarboxylase activity (GO:0004590), Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221))
Ribulose-phoshate binding barrel (db=superfamily db_id=SSF51366 from=2 to=296 evalue=9.8e-58 interpro_id=IPR011060 interpro_description=Ribulose-phosphate binding barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD1_19_3
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(1594..2139)
DNA (546bp) protein (182aa)
hypothetical protein
seg (db=Seg db_id=seg from=61 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=103)
ACD1_19_4
unknown

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comp(2160..3035)
DNA (876bp) protein (292aa)
metal-dependent hydrolase
Putative uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH02_9SPHI (db=UNIREF evalue=4.0e-34 bit_score=148.0 identity=36.64 coverage=84.5890410958904)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
DNase I-like (db=superfamily db_id=SSF56219 from=44 to=290 evalue=1.2e-20 interpro_id=IPR005135 interpro_description=Endonuclease/exonuclease/phosphatase)
ACD1_19_5
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

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comp(3220..3492)
DNA (273bp) protein (91aa)
3220..3492 - (rbs_motif=None rbs_spacer=None)
ACD1_19_6
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

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comp(3641..5578)
DNA (1938bp) protein (646aa)
N-acetylmuramoyl-L-alanine amidase domain protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1S2_THERP (db=UNIREF evalue=3.0e-35 bit_score=154.0 identity=29.86 coverage=48.6068111455108)
N-acetylmuramoyl-L-alanine amidase family 2 protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
no description (db=Gene3D db_id=G3DSA:3.40.80.10 from=204 to=415 evalue=4.1e-32 interpro_id=IPR002502 interpro_description=N-acetylmuramoyl-L-alanine amidase, family 2 GO=Molecular Function: N-acetylmuramoyl-L-alanine amidase activity (GO:0008745), Biological Process: peptidoglycan catabolic process (GO:0009253))
ACD1_19_7
RBG_13_OP11_Shapirobacteria_44_7_curated, Shapirobacteria, Microgenomates, Bacteria

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comp(5695..5994)
DNA (300bp) protein (100aa)
flavodoxin
Flavoproteins (db=superfamily db_id=SSF52218 from=3 to=99 evalue=9.9e-07)
flavodoxin alias=ACD1_6936.5962.7G0007,ACD1_6936.5962.7_7,ACD1_C00019G00007 id=16858 tax=ACD1 species=Thermotoga lettingae genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae organism_group=OD1-i organism_desc=OD1-i
hypothetical protein Tax=RBG_13_OP11_Shapirobacteria_44_7_curated
Displaying 7 items

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