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ACD1_27

Alias: ACD1_246.13972.95

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD1_27_1

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comp(76..1083)
DNA (1008bp) protein (336aa)
peptidase S9 prolyl oligopeptidase active site domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=4 to=17)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=77 to=335 evalue=6.4e-44)
ACD1_27_2
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

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1259..1750
DNA (492bp) protein (164aa)
AN1-type Zinc finger protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=134 to=156)
ACD1_27_3

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2067..2630
DNA (564bp) protein (188aa)
Conserved protein YuiC n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AHD2_BACPU (db=UNIREF evalue=8.0e-17 bit_score=89.7 identity=46.0 coverage=50.0)
cell wall-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg (db=Seg db_id=seg from=47 to=72)
ACD1_27_4
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

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3058..3600
DNA (543bp) protein (181aa)
dCMP_cyt_deam_1 (db=HMMPfam db_id=PF00383 from=8 to=129 evalue=1.2e-07 interpro_id=IPR002125 interpro_description=CMP/dCMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
ACD1_27_5

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comp(3657..4217)
DNA (561bp) protein (187aa)
uracil-DNA glycosylase
Phage SPO1 DNA polymerase-related protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS51_9BACT (db=UNIREF evalue=8.0e-41 bit_score=169.0 identity=47.31 coverage=98.3957219251337)
seg (db=Seg db_id=seg from=112 to=121)
UDG_fam4: uracil-DNA glycosylase, family (db=HMMTigr db_id=TIGR00758 from=17 to=186 evalue=3.9e-68 interpro_id=IPR005273 interpro_description=Phage SPO1 DNA polymerase-related protein)
ACD1_27_6
GWF2_OD1_34_56, Moranbacteria, Parcubacteria, Bacteria

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comp(5326..6792)
DNA (1467bp) protein (489aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=203 to=225)
transmembrane_regions (db=TMHMM db_id=tmhmm from=245 to=263)
transmembrane_regions (db=TMHMM db_id=tmhmm from=276 to=294)
transfers mannosyl residues to the hydroxy group of serine or threonine residues, producing cell-wall mannoproteins. It acts only on long-chain α-dihydropolyprenyl derivatives, larger than C35 (CAZY) Jill Banfield (11/15/12)
ACD1_27_7

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comp(6796..7326)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NKT9_9DELT (db=UNIREF evalue=4.0e-23 bit_score=110.0 identity=37.06 coverage=90.3954802259887)
phosphodiesterase, MJ0936 family
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=1 to=173 evalue=2.3e-33)
no description (db=Gene3D db_id=G3DSA:3.60.21.10 from=1 to=167 evalue=2.9e-22)
ACD1_27_8

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comp(7351..7830)
DNA (480bp) protein (160aa)
putative NUDIX hydrolase
NUDIX_BOX (db=PatternScan db_id=PS00893 from=37 to=58 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=4 to=159 evalue=2.0e-27 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=1 to=159 evalue=4.3e-21 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD1_27_9

Not on your lists

comp(7951..8772)
DNA (822bp) protein (274aa)
apurinic endonuclease Apn1 (EC:3.1.21.2)
AP_NUCLEASE_F2_3 (db=PatternScan db_id=PS00731 from=209 to=225 evalue=0.0 interpro_id=IPR018246 interpro_description=AP endonuclease, family 2, zinc binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: endonuclease activity (GO:0004519), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270))
no description (db=HMMSmart db_id=SM00518 from=2 to=272 evalue=6.1e-75 interpro_id=IPR001719 interpro_description=Endodeoxyribonuclease IV GO=Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: deoxyribonuclease IV (phage-T4-induced) activity (GO:0008833))
no description (db=Gene3D db_id=G3DSA:3.20.20.150 from=1 to=269 evalue=4.0e-71 interpro_id=IPR013022 interpro_description=Xylose isomerase-like, TIM barrel domain)
ACD1_27_10

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9023..9745
DNA (723bp) protein (241aa)
phosphoesterase
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=10 to=227 evalue=5.5e-22)
Metallophos (db=HMMPfam db_id=PF00149 from=11 to=126 evalue=1.2e-05 interpro_id=IPR004843 interpro_description=Metallophosphoesterase GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.60.21.10 from=9 to=221 evalue=3.6e-05)
ACD1_27_11
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

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9813..9968
DNA (156bp) protein (52aa)
9813..9968 + (rbs_motif=TAA rbs_spacer=15bp)
ACD1_27_12

Not on your lists

comp(10012..10971)
DNA (960bp) protein (320aa)
MgpA protein
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=18 to=311 evalue=1.1e-58)
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR13734 from=9 to=313 evalue=1.2e-45)
POLYA POLYMERASE (db=HMMPanther db_id=PTHR13734:SF4 from=9 to=313 evalue=1.2e-45)
ACD1_27_13

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comp(11081..11410)
DNA (330bp) protein (110aa)
Ribosome-binding factor A n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ3_9BACT (db=UNIREF evalue=6.0e-10 bit_score=66.2 identity=36.36 coverage=98.1818181818182)
RBFA (db=HMMPfam db_id=PF02033 from=4 to=106 evalue=3.4e-18 interpro_id=IPR000238 interpro_description=Ribosome-binding factor A GO=Biological Process: rRNA processing (GO:0006364))
Ribosome-binding factor A, RbfA (db=superfamily db_id=SSF89919 from=5 to=100 evalue=7.8e-17 interpro_id=IPR000238 interpro_description=Ribosome-binding factor A GO=Biological Process: rRNA processing (GO:0006364))
no description (db=Gene3D db_id=G3DSA:3.30.300.20 from=4 to=109 evalue=7.0e-14 interpro_id=IPR015946 interpro_description=K homology-like, alpha/beta)
ACD1_27_14
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11540..13321)
DNA (1782bp) protein (594aa)
translation initiation factor IF-2
translation initiation factor IF-2
Translation initiation factor IF-2 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=IF2_CARHZ (db=UNIREF evalue=3.0e-135 bit_score=486.0 identity=45.52 coverage=97.979797979798)
seg (db=Seg db_id=seg from=170 to=181)
ACD1_27_15

Not on your lists

comp(13362..13865)
DNA (504bp) protein (168aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSN0_9FIRM (db=UNIREF evalue=3.0e-22 bit_score=107.0 identity=42.98 coverage=70.8333333333333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD58859.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 15 items

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