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ACD1_28

Alias: ACD1_28.8630.81

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD1_28_1
GWD2_OD1_38_11, Parcubacteria, Bacteria

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comp(110..559)
DNA (450bp) protein (150aa)
hypothetical protein
Uncharacterised conserved protein, UCP004681 type (db=HMMPIR db_id=PIRSF004681 from=1 to=149 evalue=2.3e-36 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
YjbQ-like (db=superfamily db_id=SSF111038 from=3 to=149 evalue=1.6e-35 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
UPF0047 (db=HMMPfam db_id=PF01894 from=22 to=147 evalue=3.1e-32 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
ACD1_28_2

Not on your lists

comp(607..1728)
DNA (1122bp) protein (374aa)
malic enzyme
malic enzyme
Malic enzyme n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4IYD3_BUTFI (db=UNIREF evalue=2.0e-115 bit_score=419.0 identity=61.76 coverage=98.9304812834225)
seg (db=Seg db_id=seg from=183 to=193)
Not to be confused with malate dehydrogenase of TCA Malic enzyme converts malate to pyruvate, releases CO2 and NADPH. Might be used to generate NADPH on substrates with low flux thru PP. Could also with MDH and pyruvate carboxylase would catalyze an ATP dependent metabolic cycle converting NADH to NADPH without a loss of carbon. (sauer, 2005) kelly wrighton (11/15/12)
ACD1_28_3
GWD2_OD1_38_11, Parcubacteria, Bacteria

Not on your lists

comp(1891..2817)
DNA (927bp) protein (309aa)
thioredoxin reductase
seg (db=Seg db_id=seg from=5 to=18)
seg (db=Seg db_id=seg from=298 to=308)
seg (db=Seg db_id=seg from=285 to=294)
ACD1_28_4
GWD2_OD1_38_11, Parcubacteria, Bacteria

Not on your lists

comp(3515..4633)
DNA (1119bp) protein (373aa)
Cytochrome c biogenesis protein
seg (db=Seg db_id=seg from=225 to=239)
transmembrane_regions (db=TMHMM db_id=tmhmm from=216 to=238)
transmembrane_regions (db=TMHMM db_id=tmhmm from=272 to=294)
ACD1_28_5

Not on your lists

comp(4712..5431)
DNA (720bp) protein (240aa)
undecaprenyl pyrophosphate synthetase
Undecaprenyl pyrophosphate synthetase 1 n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M707_CAPGI (db=UNIREF evalue=1.0e-37 bit_score=159.0 identity=36.75 coverage=95.0)
DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE (db=HMMPanther db_id=PTHR10291 from=7 to=239 evalue=1.8e-59 interpro_id=IPR001441 interpro_description=Di-trans-poly-cis-decaprenylcistransferase-like GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
Prenyltransf (db=HMMPfam db_id=PF01255 from=17 to=239 evalue=7.6e-56 interpro_id=IPR001441 interpro_description=Di-trans-poly-cis-decaprenylcistransferase-like GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
ACD1_28_6
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(5589..6644)
DNA (1056bp) protein (352aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39VY7_GEOMG (db=UNIREF evalue=5.0e-117 bit_score=424.0 identity=61.96 coverage=98.0113636363636)
seg (db=Seg db_id=seg from=218 to=229)
ACD1_28_7
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(6696..7766)
DNA (1071bp) protein (357aa)
geranylgeranyl pyrophosphate synthase
Geranylgeranyl pyrophosphate synthase n=1 Tax=uncultured euryarchaeote Alv-FOS1 RepID=Q3SAB7_9EURY (db=UNIREF evalue=2.0e-50 bit_score=203.0 identity=36.21 coverage=95.2380952380952)
POLYPRENYL_SYNTHASE_2 (db=PatternScan db_id=PS00444 from=234 to=246 evalue=0.0 interpro_id=IPR000092 interpro_description=Polyprenyl synthetase GO=Biological Process: isoprenoid biosynthetic process (GO:0008299))
Terpenoid synthases (db=superfamily db_id=SSF48576 from=12 to=356 evalue=6.4e-69 interpro_id=IPR008949 interpro_description=Terpenoid synthase)
ACD1_28_8
GWD2_OD1_38_11, Parcubacteria, Bacteria

Not on your lists

7943..8548
DNA (606bp) protein (202aa)
7943..8548 + (rbs_motif=None rbs_spacer=None)
Tax=GWD2_OD1_38_11
ACD1_28_9
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

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comp(8595..8696)
DNA (102bp) protein (34aa)
8595..8696 - (rbs_motif=None rbs_spacer=None)
Displaying 9 items

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