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ACD1_51

Alias: ACDUNK_501.18290.85

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD1_51_1
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3..950)
DNA (948bp) protein (316aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=19 to=30)
hypothetical protein alias=ACDUNK_501.18290.85G0001,ACDUNK_501.18290.85_1,ACD1_C00051G00001 id=17127 tax=ACD1 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
ACD1_51_2
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(981..1484)
DNA (504bp) protein (168aa)
hypothetical protein (db=KEGG evalue=9.0e-09 bit_score=62.8 identity=46.91 coverage=44.047619047619)
seg (db=Seg db_id=seg from=6 to=19)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
EF_HAND_1 (db=PatternScan db_id=PS00018 from=144 to=156 evalue=0.0 interpro_id=IPR018247 interpro_description=EF-Hand 1, calcium-binding site)
ACD1_51_3
GWC2_OD1-i_37_82, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1512..1889)
DNA (378bp) protein (126aa)
fibronectin type III domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
fn3 (db=HMMPfam db_id=PF00041 from=31 to=101 evalue=1.0e-10 interpro_id=IPR003961 interpro_description=Fibronectin, type III)
Fibronectin type III (db=superfamily db_id=SSF49265 from=32 to=109 evalue=4.4e-08 interpro_id=IPR008957 interpro_description=Fibronectin, type III-like fold)
ACD1_51_4
GWD2_OD1_38_7, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2095..3171)
DNA (1077bp) protein (359aa)
Zn-dependent alcohol dehydrogenase
Zn-dependent alcohol dehydrogenase
Zn-dependent alcohol dehydrogenase n=3 Tax=Sphingomonadaceae RepID=D4YYA9_SPHJU (db=UNIREF evalue=8.0e-136 bit_score=487.0 identity=68.75 coverage=93.3147632311978)
ADH_ZINC (db=PatternScan db_id=PS00059 from=80 to=94 evalue=0.0 interpro_id=IPR002328 interpro_description=Alcohol dehydrogenase, zinc-containing, conserved site GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
ACD1_51_5
GWA2_Planctomycetes_40_7_curated, Planctomycetes, Bacteria

Not on your lists

comp(3574..4029)
DNA (456bp) protein (152aa)
Histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4M0_9DELT (db=UNIREF evalue=2.0e-11 bit_score=71.2 identity=38.21 coverage=75.0)
response regulator receiver protein
CheY-like (db=superfamily db_id=SSF52172 from=1 to=112 evalue=4.4e-21 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=1 to=109 evalue=1.5e-19 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD1_51_6

Not on your lists

comp(4294..4809)
DNA (516bp) protein (172aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZQ2_9BRAD (db=UNIREF evalue=4.0e-62 bit_score=239.0 identity=64.5 coverage=95.9302325581395)
Uncharacterized protein {ECO:0000313|EMBL:EKE19053.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD1_51_7

Not on your lists

comp(5114..5647)
DNA (534bp) protein (178aa)
isopentenyl-diphosphate delta-isomerase
seg (db=Seg db_id=seg from=142 to=154)
Nudix (db=superfamily db_id=SSF55811 from=4 to=169 evalue=1.4e-26 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=3 to=170 evalue=2.0e-23 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD1_51_8
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

Not on your lists

comp(5753..6334)
DNA (582bp) protein (194aa)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=192 evalue=3.1e-10)
GUANYLATE_KINASE_2 (db=ProfileScan db_id=PS50052 from=3 to=193 evalue=9.335 interpro_id=IPR008144 interpro_description=Guanylate kinase)
ACD1_51_9
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

Not on your lists

comp(6501..6647)
DNA (147bp) protein (49aa)

This feature has no annotations

ACD1_51_10
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

Not on your lists

comp(6668..7024)
DNA (357bp) protein (119aa)
coiled-coil (db=Coil db_id=coil from=34 to=69 evalue=NA)
seg (db=Seg db_id=seg from=30 to=38)
seg (db=Seg db_id=seg from=43 to=57)
ACD1_51_11
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

Not on your lists

comp(7896..8162)
DNA (267bp) protein (89aa)

This feature has no annotations

ACD1_51_12
RIFOXYB12_FULL_Sulfurimonas_35_9_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8481..9680)
DNA (1200bp) protein (400aa)
restriction endonuclease Hin4II
restriction endonuclease Hin4II
Putative uncharacterized protein n=1 Tax=Simonsiella muelleri ATCC 29453 RepID=D6L0K8_9NEIS (db=UNIREF evalue=1.0e-96 bit_score=357.0 identity=48.77 coverage=89.75)
hpy:HP0053 hypothetical protein alias=ACDUNK_501.18290.85G0012,ACDUNK_501.18290.85_12,ACD1_C00051G00012 id=17129 tax=ACD1 species=Simonsiella muelleri genus=Simonsiella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
ACD1_51_13
GWF2_OD1_43_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9684..12173)
DNA (2490bp) protein (830aa)
restriction endonuclease Eco57I
Cytosine-specific methyltransferase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NTR3_BACSE (db=UNIREF evalue=0.0 bit_score=875.0 identity=58.21 coverage=99.0361445783133)
seg (db=Seg db_id=seg from=339 to=350)
seg (db=Seg db_id=seg from=720 to=740)
ACD1_51_14
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12653..13186)
DNA (534bp) protein (178aa)
Isopentenyldiphosphate isomerase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP30_9BACT (db=UNIREF evalue=3.0e-11 bit_score=71.2 identity=29.73 coverage=78.0898876404494)
MutT/NUDIX family protein (db=KEGG evalue=4.0e-10 bit_score=67.4 identity=33.08 coverage=69.6629213483146)
Nudix (db=superfamily db_id=SSF55811 from=8 to=160 evalue=7.2e-23 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=2 to=177 evalue=2.2e-19 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD1_51_15
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

Not on your lists

comp(13688..13888)
DNA (201bp) protein (67aa)

This feature has no annotations

ACD1_51_16
R_RIF_OD1_13_47_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(14194..14781)
DNA (588bp) protein (196aa)
seg (db=Seg db_id=seg from=11 to=27)
seg 11..27 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_47_11_curated
ACD1_51_17
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

Not on your lists

comp(14806..15249)
DNA (444bp) protein (148aa)
coiled-coil (db=Coil db_id=coil from=126 to=147 evalue=NA)
ACD1_51_18
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

Not on your lists

comp(15792..16457)
DNA (666bp) protein (222aa)
seg (db=Seg db_id=seg from=53 to=67)
ACD1_51_19
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

Not on your lists

comp(16797..17348)
DNA (552bp) protein (184aa)
seg (db=Seg db_id=seg from=101 to=115)
ACD1_51_20
R_RIF_OD1_09_50_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(17652..18071)
DNA (420bp) protein (140aa)
id=17134 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_50_20_curated
Displaying 20 items

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