ggKbase home page

ACD1_53_20

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(17761..19188)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 38 subunit, RpoS similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 372.0
  • Bit_score: 410
  • Evalue 7.10e-112
seg (db=Seg db_id=seg from=374 to=386) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
seg (db=Seg db_id=seg from=97 to=113) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_OD1-i_37_82 → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGAAAAAAGTGCAAAAAAAGGTGGCCAAAAAAATAGTTCCAGCAAAGAAGGTGGCAAAAGCTGCAATAAAAAAAGTTGCAAAAATTTCACCGAAAAAAGTTGCTGTTGCTGCAAAGAAAACTGTAAGTAAAGTTAATGTAAAAAAAATCGTGCCAAATAAAAATGCTAAAGCAGTTAAAAAAAACGTAGCAAAGAAGCCTGAAGTGAAAAAACCTGAACCTGCTGCTAAAAAGATTGAACAAAAAGCTCACACTCCAAAGCAGGCGCCTCTTAAGCATGGCGATCAGAAAAAACCAGCTCCTAAAGCTGTTAAGAAAGAAGAAGTTTCTGAAAAAGTTGATATTATCGGTGAATTGATTGCGCGTGGAAAACAAAGAGGCTTCGTCACAGAAGATGAGATCATCCACCTTTTGCCAGAAATTGAAGAAGAGATAGAGGAGCTTGAAAATCTTTATGAAAGATTGGAGACAGCGGGTGTTAAGGTTGTCATCTCAGATGATATGCTTAAGATAGATTCTGACAAGGAAGCCGAAGCTTTCGAGAAGAGCAAAAAGGAAAAAAATGCCGACATGCTTTTAAGTGAGGGAATCGAAGACAGTTCTTCCGACTTAGTGCAGATGTATCTTCGTGAAATTGGTCGCGTGCCGCTTTTGAAATCTGAGGAGGAAGTAAAGCTAGCAAAGGCCAATGAAAAAGGAGACCTTGCTGCTAAGCAAAAATTGACTGAAGCAAACCTACGTTTGGTTGTAAGTATCGCAAAAAAATATGTGGGACGCTCTCATAATCTTTCCTTGCTAGATTTGATTCAGGAGGGAAACATCGGACTTTTTCGCGCAGTAGAAAAATTTGATTACCGCAAAGGTTACAAATTCTCAACTTATGCAACTTGGTGGATTCGCCAAGCAATTACGCGAGCCTTGGCTGACCAATCAAGAACAATTCGTATTCCTGTGCATATGGTGGAAACGATTAACAAGTATACGCAGATTACTAGAAGATTAGTTCAGGAACTCGGACGCGAACCTTTGCCAGAAGAAATTGCAGCTGAAATGAATTTAGAAGTCGACAAAATTCGTCATATTCAAAAAATTTCACAGGAAACGGTTTCCTTAGAAACGTCTGTGGGAGACAGCGACGACGACAGTGTACTTGGAGACTTCATTGAAGACACGGAGACCGTTATGCCTCACCAGGTTGCTTCACGCAAGCTTTTAAAGAACCATGTGGGCGAAGTTTTGACTGATCTTACTCCTCGCGAACAGAAAATTCTGAAAATTCGTTTTGGATTGGAAGATGGCGTTACTCACACCTTGGAAGAAGTTGGAAAAGAATTTGGGGTTACACGCGAACGTATTCGTCAGATTGAGGCGAAAGCACTTGAAAAAATCAGACAACACAAAGGTATCAGCAAATTGAAAGATTATTAA
PROTEIN sequence
Length: 476
MKKVQKKVAKKIVPAKKVAKAAIKKVAKISPKKVAVAAKKTVSKVNVKKIVPNKNAKAVKKNVAKKPEVKKPEPAAKKIEQKAHTPKQAPLKHGDQKKPAPKAVKKEEVSEKVDIIGELIARGKQRGFVTEDEIIHLLPEIEEEIEELENLYERLETAGVKVVISDDMLKIDSDKEAEAFEKSKKEKNADMLLSEGIEDSSSDLVQMYLREIGRVPLLKSEEEVKLAKANEKGDLAAKQKLTEANLRLVVSIAKKYVGRSHNLSLLDLIQEGNIGLFRAVEKFDYRKGYKFSTYATWWIRQAITRALADQSRTIRIPVHMVETINKYTQITRRLVQELGREPLPEEIAAEMNLEVDKIRHIQKISQETVSLETSVGDSDDDSVLGDFIEDTETVMPHQVASRKLLKNHVGEVLTDLTPREQKILKIRFGLEDGVTHTLEEVGKEFGVTRERIRQIEAKALEKIRQHKGISKLKDY*