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ACD22_2

Alias: ACD22_34208.15096.19

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_2_1

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399..1457
DNA (1059bp) protein (353aa)
Putative tRNA ribosyltransferase n=1 Tax=Pseudomonas aeruginosa RepID=Q7DH22_PSEAE (db=UNIREF evalue=6.0e-81 bit_score=304.0 identity=42.49 coverage=97.1671388101983)
hypothetical protein
no description (db=Gene3D db_id=G3DSA:3.20.20.105 from=2 to=345 evalue=2.1e-86 interpro_id=IPR002616 interpro_description=Queuine/other tRNA-ribosyltransferase GO=Biological Process: tRNA modification (GO:0006400), Molecular Function: queuine tRNA-ribosyltransferase activity (GO:0008479), Biological Process: queuosine biosynthetic process (GO:0008616))
ACD22_2_2

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1460..2497
DNA (1038bp) protein (346aa)
Peptide chain release factor 1
Peptide chain release factor 1
Peptide chain release factor 1 n=1 Tax=Dehalogenimonas lykanthroporepellens BL-DC-9 RepID=D4XXF2_9CHLR (db=UNIREF evalue=5.0e-83 bit_score=311.0 identity=50.82 coverage=83.2369942196532)
seg (db=Seg db_id=seg from=330 to=345)
ACD22_2_3

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comp(2439..3656)
DNA (1218bp) protein (406aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CHC6_9BACI (db=UNIREF evalue=1.0e-57 bit_score=227.0 identity=41.98 coverage=78.3251231527094)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=19 to=34)
ACD22_2_4

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comp(3660..4649)
DNA (990bp) protein (330aa)
3660..4649 - (rbs_motif=AAGAA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD99985.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD22_2_5

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comp(4634..5650)
DNA (1017bp) protein (339aa)
4634..5650 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD99986.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_2_6

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comp(5745..6002)
DNA (258bp) protein (86aa)
rpsR; ribosomal protein S18
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479:SF16 from=9 to=84 evalue=7.7e-25)
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479 from=9 to=84 evalue=7.7e-25 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S18 (db=HMMPfam db_id=PF01084 from=26 to=77 evalue=4.1e-23 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD22_2_7

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comp(6002..6475)
DNA (474bp) protein (158aa)
hypothetical protein
ssb: single-strand binding protein (db=HMMTigr db_id=TIGR00621 from=3 to=152 evalue=7.0e-47 interpro_id=IPR011344 interpro_description=Single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697), Biological Process: DNA replication (GO:0006260))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=3 to=134 evalue=4.3e-46 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=143 evalue=2.2e-41 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
ACD22_2_8

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comp(6493..6780)
DNA (288bp) protein (96aa)
hypothetical protein
Ribosomal protein S6 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5R4D4_9FIRM (db=UNIREF evalue=2.0e-11 bit_score=71.2 identity=36.96 coverage=94.7916666666667)
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=2 to=92 evalue=3.6e-20 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=95 evalue=2.2e-19 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD22_2_9

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comp(8125..8928)
DNA (804bp) protein (268aa)
seg (db=Seg db_id=seg from=58 to=66)
DUF1814 (db=HMMPfam db_id=PF08843 from=45 to=209 evalue=2.0e-15 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
Uncharacterized protein {ECO:0000313|EMBL:EKD99978.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD22_2_10

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comp(8921..9496)
DNA (576bp) protein (192aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQ83_9DELT (db=UNIREF evalue=9.0e-12 bit_score=73.2 identity=36.69 coverage=67.1875)
seg (db=Seg db_id=seg from=90 to=102)
Uncharacterized protein {ECO:0000313|EMBL:EKD99979.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_2_11

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comp(9561..10430)
DNA (870bp) protein (290aa)
conserved exported protein of unknown function
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
Memo (db=HMMPfam db_id=PF01875 from=69 to=277 evalue=5.4e-22 interpro_id=IPR002737 interpro_description=UPF0103/Mediator of ErbB2-driven cell motility (Memo), related)
UNCHARACTERIZED DUF52 (db=HMMPanther db_id=PTHR11060 from=67 to=289 evalue=1.7e-07 interpro_id=IPR002737 interpro_description=UPF0103/Mediator of ErbB2-driven cell motility (Memo), related)
ACD22_2_12

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comp(10430..13015)
DNA (2586bp) protein (862aa)
Large extracellular alpha-helical protein
seg (db=Seg db_id=seg from=298 to=314)
seg (db=Seg db_id=seg from=375 to=383)
seg (db=Seg db_id=seg from=713 to=723)
Displaying 12 items

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