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ACD22_17

Alias: ACD22_919.19425.15

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_17_1

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110..1012
DNA (903bp) protein (301aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=251)
transmembrane_regions (db=TMHMM db_id=tmhmm from=194 to=216)
transmembrane_regions (db=TMHMM db_id=tmhmm from=266 to=283)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
ACD22_17_2
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

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comp(1175..2827)
DNA (1653bp) protein (551aa)
recombinase
seg (db=Seg db_id=seg from=486 to=508)
no description (db=HMMSmart db_id=SM00857 from=15 to=163 evalue=7.2e-34 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
Resolvase-like (db=superfamily db_id=SSF53041 from=13 to=164 evalue=4.0e-25 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
ACD22_17_3
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(2891..3433)
DNA (543bp) protein (181aa)
seg (db=Seg db_id=seg from=145 to=163)
seg 145..163 Tax=RBG_16_WWE3_37_10_curated
ACD22_17_4
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(3393..3578)
DNA (186bp) protein (62aa)
3393..3578 - (rbs_motif=TAA rbs_spacer=4bp)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD22_17_5
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(3583..3870)
DNA (288bp) protein (96aa)
3583..3870 - (rbs_motif=TAA rbs_spacer=5bp)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD22_17_6
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(4028..4438)
DNA (411bp) protein (137aa)
hypothetical protein
hypothetical protein alias=ACD22_919.19425.15G0006,ACD22_919.19425.15_6,ACD22_C00017G00006 id=22656 tax=ACD22 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia organism_group=WWE3 organism_desc=WWE3
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD22_17_7
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

4522..5481
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei 1710a RepID=C6TYX4_BURPS (db=UNIREF evalue=3.0e-12 bit_score=76.3 identity=26.79 coverage=93.125)
hypothetical protein (db=KEGG evalue=2.0e-10 bit_score=70.5 identity=23.49 coverage=90.9375)
seg (db=Seg db_id=seg from=142 to=155)
Putative uncharacterized protein Tax=RBG_16_WWE3_37_10_curated
ACD22_17_8
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

5508..5786
DNA (279bp) protein (93aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
seg (db=Seg db_id=seg from=8 to=19)
transmembrane_regions 5..27 Tax=RBG_16_WWE3_37_10_curated
ACD22_17_9

Not on your lists

comp(5821..6678)
DNA (858bp) protein (286aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
Uncharacterized protein {ECO:0000313|EMBL:EKD99436.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_17_10

Not on your lists

comp(6839..7705)
DNA (867bp) protein (289aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=245 to=264)
seg (db=Seg db_id=seg from=234 to=243)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=65 to=87)
ACD22_17_11
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(7862..8509)
DNA (648bp) protein (216aa)
hypothetical protein
hypothetical protein CATMIT_02715 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196C77C (db=UNIREF evalue=2.0e-09 bit_score=65.5 identity=25.0 coverage=87.962962962963)
transmembrane_regions (db=TMHMM db_id=tmhmm from=142 to=164)
transmembrane_regions (db=TMHMM db_id=tmhmm from=110 to=129)
ACD22_17_12
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(8528..8692)
DNA (165bp) protein (55aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=3 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions 3..21 Tax=RBG_16_WWE3_37_10_curated
ACD22_17_13
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

8936..9418
DNA (483bp) protein (161aa)
DinB/YfiT-like putative metalloenzymes (db=superfamily db_id=SSF109854 from=8 to=149 evalue=1.1e-09)
DinB/YfiT-like putative metalloenzymes Tax=RBG_16_WWE3_37_10_curated
ACD22_17_14

Not on your lists

comp(9486..10112)
DNA (627bp) protein (209aa)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=18 to=208 evalue=7.0e-18 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=19 to=187 evalue=1.0e-07 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=81 to=183 evalue=3.7e-07 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
GNAT (db=ProfileScan db_id=PS51186 from=17 to=201 evalue=12.289 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase GO=Molecular Function: N-acetyltransferase activity (GO:0008080), Biological Process: metabolic process (GO:0008152))
ACD22_17_15

Not on your lists

comp(10201..10971)
DNA (771bp) protein (257aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=230 to=252)
seg (db=Seg db_id=seg from=1 to=12)
seg (db=Seg db_id=seg from=22 to=35)
ACD22_17_16
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

11171..12829
DNA (1659bp) protein (553aa)
hypothetical protein
CHAP (db=HMMPfam db_id=PF05257 from=73 to=191 evalue=3.0e-09 interpro_id=IPR007921 interpro_description=Cysteine, histidine-dependent amidohydrolase/peptidase)
Cysteine proteinases (db=superfamily db_id=SSF54001 from=41 to=194 evalue=3.6e-09)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD22_17_17
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

13382..13726
DNA (345bp) protein (115aa)
coiled-coil (db=Coil db_id=coil from=81 to=102 evalue=NA)
coiled-coil 81..102 Tax=RBG_16_WWE3_37_10_curated
ACD22_17_18
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(13885..15792)
DNA (1908bp) protein (636aa)
hypothetical protein (db=KEGG evalue=2.0e-07 bit_score=61.6 identity=22.65 coverage=35.8490566037736)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=3 to=16)
Kelch motif (db=superfamily db_id=SSF117281 from=236 to=450 evalue=1.1e-14)
ACD22_17_19
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

15823..16041
DNA (219bp) protein (73aa)
15823..16041 + (rbs_motif=TATA rbs_spacer=7bp)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD22_17_20
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

16500..17405
DNA (906bp) protein (302aa)
hypothetical protein
hypothetical protein
Mrr restriction endonuclease n=1 Tax=Beggiatoa sp. PS RepID=A7BQW6_9GAMM (db=UNIREF evalue=1.0e-84 bit_score=316.0 identity=50.84 coverage=97.682119205298)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=163 to=279 evalue=1.4e-12 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
ACD22_17_21
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(17506..17904)
DNA (399bp) protein (133aa)
17506..17904 - (rbs_motif=TATAAT rbs_spacer=6bp)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD22_17_22
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

17957..18052
DNA (96bp) protein (32aa)
17957..18052 + (rbs_motif=ATA rbs_spacer=3bp)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD22_17_23
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

comp(18013..18147)
DNA (135bp) protein (45aa)
18013..18147 - (rbs_motif=ATA rbs_spacer=3bp)
hypothetical protein Tax=RBG_16_WWE3_37_10_curated
ACD22_17_24

Not on your lists

comp(18104..19156)
DNA (1053bp) protein (351aa)
rlmN2; ribosomal RNA large subunit methyltransferase Cfr (EC:2.1.1.224)
rlmN2; ribosomal RNA large subunit methyltransferase Cfr (EC:2.1.1.224)
Ribosomal RNA large subunit methyltransferase cfr n=11 Tax=Clostridium RepID=CFR_CLOB1 (db=UNIREF evalue=2.0e-93 bit_score=345.0 identity=47.55 coverage=96.011396011396)
Predicted radical SAM enzyme, Cfr type (db=HMMPIR db_id=PIRSF006004 from=1 to=349 evalue=8.2e-91 interpro_id=IPR004383 interpro_description=Ribosomal RNA large subunit methyltransferase RlmN; GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: RNA methyltransferase activity (GO:0008173))
Displaying 24 items

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