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ACD22_18

Alias: ACD22_4396.23072.22

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_18_1

Not on your lists

2..205
DNA (204bp) protein (68aa)
2..205 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD99805.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_18_2

Not on your lists

comp(250..1017)
DNA (768bp) protein (256aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD99806.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD22_C00018G00002,ACD22_4396.23072.22G0002,ACD22_4396.23072.22_2 id=22684 tax=ACD22 species=Sebaldella termitidis genus=Sebaldella taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria organism_group=WWE3 organism_desc=WWE3
ACD22_18_3

Not on your lists

1160..1378
DNA (219bp) protein (73aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD99807.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_18_4

Not on your lists

1467..1709
DNA (243bp) protein (81aa)
1467..1709 + (rbs_motif=ATAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD99808.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_18_5

Not on your lists

1717..2124
DNA (408bp) protein (136aa)
MutT/nudix family protein n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2U0_LISDA (db=UNIREF evalue=4.0e-13 bit_score=77.0 identity=37.6 coverage=88.2352941176471)
DNA mismatch repair protein MutT
NUDIX_BOX (db=PatternScan db_id=PS00893 from=36 to=57 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=5 to=118 evalue=9.0e-18 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD22_18_6

Not on your lists

2193..2390
DNA (198bp) protein (66aa)
seg (db=Seg db_id=seg from=2 to=13)
Uncharacterized protein {ECO:0000313|EMBL:EKD99810.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_18_7

Not on your lists

2406..2834
DNA (429bp) protein (143aa)
2406..2834 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD99811.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD22_18_8

Not on your lists

comp(2856..3206)
DNA (351bp) protein (117aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=87)
seg (db=Seg db_id=seg from=27 to=40)
ACD22_18_9

Not on your lists

3322..3954
DNA (633bp) protein (211aa)
seg (db=Seg db_id=seg from=139 to=158)
Uncharacterized protein {ECO:0000313|EMBL:EKD99813.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_18_10

Not on your lists

4006..4293
DNA (288bp) protein (96aa)
nucleotidyltransferase
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=1 to=91 evalue=1.7e-18)
NTP_transf_2 (db=HMMPfam db_id=PF01909 from=12 to=88 evalue=9.2e-10 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
no description (db=Gene3D db_id=G3DSA:3.30.460.10 from=23 to=95 evalue=4.3e-05)
ACD22_18_11

Not on your lists

4280..4636
DNA (357bp) protein (119aa)
hypothetical protein
Similar to tr|P72996|P72996 n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YHJ6_MICAE (db=UNIREF evalue=3.0e-14 bit_score=80.9 identity=41.0 coverage=82.3529411764706)
DUF86 (db=HMMPfam db_id=PF01934 from=21 to=106 evalue=5.9e-19 interpro_id=IPR008201 interpro_description=Protein of unknown function DUF86)
Uncharacterized protein {ECO:0000313|EMBL:EKD99815.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_18_12

Not on your lists

comp(4785..5432)
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1MZX4_9GAMM (db=UNIREF evalue=2.0e-35 bit_score=152.0 identity=47.8 coverage=73.1481481481482)
DNA polymerase III subunit epsilon
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=7 to=199 evalue=9.8e-47 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=9 to=176 evalue=5.5e-42)
ACD22_18_13

Not on your lists

5493..5921
DNA (429bp) protein (143aa)
hypothetical protein
seg (db=Seg db_id=seg from=101 to=110)
seg (db=Seg db_id=seg from=5 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=23)
ACD22_18_14

Not on your lists

comp(5914..6405)
DNA (492bp) protein (164aa)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=1 to=143 evalue=1.5e-07)
Uncharacterized protein {ECO:0000313|EMBL:EKD99818.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_18_15

Not on your lists

6513..6998
DNA (486bp) protein (162aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=7 to=21)
Uncharacterized protein {ECO:0000313|EMBL:EKD99819.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_18_16

Not on your lists

7131..7820
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSR3_9BACT (db=UNIREF evalue=1.0e-71 bit_score=273.0 identity=55.45 coverage=95.2173913043478)
two component transcriptional regulator, winged helix family protein
no description (db=HMMSmart db_id=SM00448 from=1 to=112 evalue=1.7e-42 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CheY-like (db=superfamily db_id=SSF52172 from=1 to=187 evalue=4.8e-38 interpro_id=IPR011006 interpro_description=CheY-like)
ACD22_18_17

Not on your lists

7813..8832
DNA (1020bp) protein (340aa)
integral membrane sensor signal transduction histidine kinase
Sensor protein n=1 Tax=Bacillus thuringiensis serovar tochigiensis BGSC 4Y1 RepID=C3BXH3_BACTU (db=UNIREF evalue=4.0e-41 bit_score=172.0 identity=35.94 coverage=73.8235294117647)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
ACD22_18_18
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

8829..10064
DNA (1236bp) protein (412aa)
RND family efflux transporter, MFP subunit
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
seg (db=Seg db_id=seg from=387 to=411)
RND_mfp: efflux transporter, RND family, MFP (db=HMMTigr db_id=TIGR01730 from=43 to=397 evalue=1.7e-19 interpro_id=IPR006143 interpro_description=Secretion protein HlyD GO=Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein secretion (GO:0009306), Cellular Component: membrane (GO:0016020))
ACD22_18_19
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

10030..10746
DNA (717bp) protein (239aa)
ABC transporter ATPase
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=154 to=168 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=14 to=238 evalue=1.6e-105)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=14 to=238 evalue=1.6e-105)
ACD22_18_20

Not on your lists

10749..11963
DNA (1215bp) protein (405aa)
ABC transporter permease
Macrolide efflux ABC transporter, permease/ATP-binding protein n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L5H9_9BACT (db=UNIREF evalue=4.0e-66 bit_score=255.0 identity=42.82 coverage=99.5061728395062)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=333 to=352)
ACD22_18_21

Not on your lists

12025..12699
DNA (675bp) protein (225aa)
hypothetical protein
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DD40_MYXXD (db=UNIREF evalue=6.0e-26 bit_score=120.0 identity=40.43 coverage=61.7777777777778)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=80 to=218 evalue=2.8e-29)
ACD22_18_22

Not on your lists

12719..14266
DNA (1548bp) protein (516aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=11 to=33)
seg (db=Seg db_id=seg from=105 to=152)
Uncharacterized protein {ECO:0000313|EMBL:EKD99797.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_18_23
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

14290..14655
DNA (366bp) protein (122aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
seg (db=Seg db_id=seg from=102 to=110)
ACD22_18_24
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

14684..17131
DNA (2448bp) protein (816aa)
Cation transport ATPase
Cation transport ATPase
Cation-transporting ATPase n=1 Tax=Methanocella paludicola SANAE RepID=D1YZK1_METPS (db=UNIREF evalue=0.0 bit_score=713.0 identity=46.02 coverage=98.6519607843137)
transmembrane_regions (db=TMHMM db_id=tmhmm from=707 to=726)
ACD22_18_25
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

17144..17836
DNA (693bp) protein (231aa)
hypothetical protein
seg (db=Seg db_id=seg from=23 to=50)
seg (db=Seg db_id=seg from=2 to=13)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
ACD22_18_26
RBG_16_WWE3_37_10_curated, WWE3, Bacteria

Not on your lists

17857..18849
DNA (993bp) protein (331aa)
SH3 type 3 domain-containing protein
seg (db=Seg db_id=seg from=35 to=46)
seg (db=Seg db_id=seg from=4 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD22_18_27

Not on your lists

comp(18824..20272)
DNA (1449bp) protein (483aa)
hypothetical protein
seg (db=Seg db_id=seg from=300 to=312)
seg (db=Seg db_id=seg from=166 to=187)
transmembrane_regions (db=TMHMM db_id=tmhmm from=348 to=370)
ACD22_18_28

Not on your lists

20302..21906
DNA (1605bp) protein (535aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=75 to=97)
seg (db=Seg db_id=seg from=312 to=326)
seg (db=Seg db_id=seg from=280 to=297)
ACD22_18_29

Not on your lists

comp(21913..23112)
DNA (1200bp) protein (400aa)
seg (db=Seg db_id=seg from=204 to=219)
seg (db=Seg db_id=seg from=114 to=126)
seg (db=Seg db_id=seg from=92 to=107)
seg (db=Seg db_id=seg from=71 to=88)
Displaying 29 items

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