Alias: ACD22_19647.13064.19
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD22_20_1
uncultured bacterium, Bacteria
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Not on your lists |
355..1905
|
hypothetical protein
hypothetical protein
HDIG/KH domain protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CGQ9_9CLOT (db=UNIREF evalue=5.0e-96 bit_score=355.0 identity=44.82 coverage=90.3288201160542)
coiled-coil (db=Coil db_id=coil from=116 to=137 evalue=NA)
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ACD22_20_2
uncultured bacterium, Bacteria
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Not on your lists |
1957..2112
|
seg (db=Seg db_id=seg from=35 to=48)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
Uncharacterized protein {ECO:0000313|EMBL:EKE00267.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD22_20_3
uncultured bacterium, Bacteria
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Not on your lists |
2125..2901
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Ser/Thr protein phosphatase
seg (db=Seg db_id=seg from=16 to=29)
no description (db=Gene3D db_id=G3DSA:3.60.21.30 from=1 to=257 evalue=9.5e-79)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=1 to=255 evalue=2.2e-68)
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ACD22_20_4
uncultured bacterium, Bacteria
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Not on your lists |
2943..3215
|
DNA-binding protein HU-beta
DNA-binding protein HU n=1 Tax=uncultured marine bacterium 439 RepID=Q6SHE6_9BACT (db=UNIREF evalue=1.0e-24 bit_score=115.0 identity=62.22 coverage=97.8021978021978)
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=46 to=65 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00411 from=1 to=90 evalue=3.3e-40 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
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ACD22_20_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(3363..3713)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=26)
seg (db=Seg db_id=seg from=11 to=25)
seg (db=Seg db_id=seg from=88 to=112)
Uncharacterized protein {ECO:0000313|EMBL:EKE00270.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD22_20_6
uncultured bacterium, Bacteria
|
Not on your lists |
comp(3785..4957)
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hypothetical protein
seg (db=Seg db_id=seg from=115 to=131)
SENSORY TRANSDUCTION HISTIDINE KINASE (DHKB) (db=HMMPanther db_id=PTHR23283:SF47 from=23 to=377 evalue=7.4e-65)
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=23 to=377 evalue=7.4e-65)
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ACD22_20_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(5008..5313)
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5008..5313 - (rbs_motif=TAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE00272.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD22_20_8
uncultured bacterium, Bacteria
|
Not on your lists |
comp(5317..6126)
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seg (db=Seg db_id=seg from=74 to=89)
seg (db=Seg db_id=seg from=45 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=262)
transmembrane_regions (db=TMHMM db_id=tmhmm from=209 to=228)
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ACD22_20_9
uncultured bacterium, Bacteria
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Not on your lists |
6179..7072
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVB4_9BACT (db=UNIREF evalue=4.0e-20 bit_score=102.0 identity=25.33 coverage=95.9731543624161)
DUF2156 (db=HMMPfam db_id=PF09924 from=109 to=293 evalue=1.2e-15)
Uncharacterized protein {ECO:0000313|EMBL:EKE00274.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD22_20_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(7053..7811)
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hypothetical protein (db=KEGG evalue=9.0e-10 bit_score=67.4 identity=30.94 coverage=66.403162055336)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=251 evalue=4.0e-30)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=59 to=161 evalue=9.4e-18)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=62 to=158 evalue=1.4e-15 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
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ACD22_20_11
uncultured bacterium, Bacteria
|
Not on your lists |
7888..8274
|
seg (db=Seg db_id=seg from=101 to=116)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=60)
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ACD22_20_12
GWB1_WWE3_41_6, WWE3, Bacteria
|
Not on your lists |
8343..9311
|
molecular chaperone DnaJ
Chaperone DnaJ domain protein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TV40_SHEHH (db=UNIREF evalue=2.0e-37 bit_score=159.0 identity=35.2 coverage=91.0216718266254)
seg (db=Seg db_id=seg from=114 to=124)
seg (db=Seg db_id=seg from=131 to=142)
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ACD22_20_13
uncultured bacterium, Bacteria
|
Not on your lists |
9301..9672
|
Methionine-tRNA ligase
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=17 to=123 evalue=3.3e-29 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=21 to=122 evalue=1.2e-26 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
tRNA_bind (db=HMMPfam db_id=PF01588 from=28 to=119 evalue=1.0e-20 interpro_id=IPR002547 interpro_description=tRNA-binding domain GO=Molecular Function: tRNA binding (GO:0000049))
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ACD22_20_14
uncultured bacterium, Bacteria
|
Not on your lists |
9684..10901
|
hypothetical protein
tRNA-I(6)A37 thiotransferase enzyme MiaB n=1 Tax=Filifactor alocis ATCC 35896 RepID=D6GSL4_9FIRM (db=UNIREF evalue=5.0e-69 bit_score=265.0 identity=39.14 coverage=88.6699507389163)
MTTASE_RADICAL (db=PatternScan db_id=PS01278 from=164 to=184 evalue=0.0 interpro_id=IPR020612 interpro_description=Methylthiotransferase, conserved site GO=Cellular Component: cellular_component (GO:0005575), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
TIGR00089: RNA modification enzyme, MiaB fa (db=HMMTigr db_id=TIGR00089 from=4 to=405 evalue=6.2e-85 interpro_id=IPR005839 interpro_description=Methylthiotransferase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
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ACD22_20_15
uncultured bacterium, Bacteria
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Not on your lists |
10880..11827
|
tRNA dimethylallyltransferase
IPPT (db=HMMPfam db_id=PF01715 from=37 to=296 evalue=5.4e-37 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: tRNA isopentenyltransferase activity (GO:0004811), Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=4 to=299 evalue=2.6e-30 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase)
TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED (db=HMMPanther db_id=PTHR11088 from=35 to=296 evalue=1.8e-28 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: tRNA isopentenyltransferase activity (GO:0004811), Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
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ACD22_20_16
uncultured bacterium, Bacteria
|
Not on your lists |
11820..12812
|
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=253 to=270)
seg (db=Seg db_id=seg from=242 to=249)
seg (db=Seg db_id=seg from=220 to=233)
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