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ACD22_22

Alias: ACD22_31475.22341.19

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_22_1

Not on your lists

comp(1..438)
DNA (438bp) protein (146aa)
hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=18 to=144 evalue=8.8e-25)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=18 to=144 evalue=9.1e-23)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=18 to=144 evalue=1.4e-17)
ACD22_22_2

Not on your lists

comp(1709..2011)
DNA (303bp) protein (101aa)
1709..2011 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE00028.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_3

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2479..2934
DNA (456bp) protein (152aa)
PAS/PAC sensor signal transduction histidine kinase
TWO COMPONENT SENSOR HISTIDINE KINASE (PHOR) (db=HMMPanther db_id=PTHR23283:SF34 from=1 to=138 evalue=1.4e-42)
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=1 to=138 evalue=1.4e-42)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=1 to=138 evalue=4.8e-39 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
ACD22_22_4

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comp(3459..4313)
DNA (855bp) protein (285aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=36)
seg (db=Seg db_id=seg from=19 to=36)
Uncharacterized protein {ECO:0000313|EMBL:EKE00007.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_5

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comp(4455..4970)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MKV2_9BACT (db=UNIREF evalue=5.0e-39 bit_score=163.0 identity=47.44 coverage=89.5348837209302)
Uncharacterized protein {ECO:0000313|EMBL:EKE00008.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_6

Not on your lists

5036..5986
DNA (951bp) protein (317aa)
RimI; acetyltransferase
seg (db=Seg db_id=seg from=120 to=131)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=177 to=312 evalue=5.0e-19 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=152 evalue=1.6e-15 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
ACD22_22_7

Not on your lists

5983..6696
DNA (714bp) protein (238aa)
ribosome small subunit-dependent GTPase A
TIGR00157: ribosome small subunit-dependent (db=HMMTigr db_id=TIGR00157 from=13 to=236 evalue=1.5e-54 interpro_id=IPR004881 interpro_description=GTPase EngC GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=19 to=234 evalue=8.9e-52)
DUF258 (db=HMMPfam db_id=PF03193 from=84 to=234 evalue=1.1e-50 interpro_id=IPR004881 interpro_description=GTPase EngC GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
ACD22_22_8

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6789..7487
DNA (699bp) protein (233aa)
NUDIX hydrolase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT97_9BACT (db=UNIREF evalue=2.0e-19 bit_score=99.4 identity=33.9 coverage=74.6781115879828)
Nudix (db=superfamily db_id=SSF55811 from=72 to=220 evalue=3.3e-12 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
NUDIX (db=HMMPfam db_id=PF00293 from=93 to=198 evalue=1.1e-07 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=81 to=196 evalue=1.0e-05 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD22_22_9

Not on your lists

7489..7965
DNA (477bp) protein (159aa)
7489..7965 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE00012.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD22_22_10

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7993..8952
DNA (960bp) protein (320aa)
hypothetical protein
DUF2419 (db=HMMPfam db_id=PF10343 from=51 to=318 evalue=4.1e-57 interpro_id=IPR019438 interpro_description=Protein of unknown function DUF2419)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR21314 from=46 to=319 evalue=1.8e-29)
Uncharacterized protein {ECO:0000313|EMBL:EKE00013.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_11

Not on your lists

comp(8969..9241)
DNA (273bp) protein (91aa)
transcriptional regulator, XRE family
HTH_3 (db=HMMPfam db_id=PF01381 from=36 to=84 evalue=1.7e-14 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=HMMSmart db_id=SM00530 from=33 to=88 evalue=7.1e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=24 to=90 evalue=1.6e-12 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
ACD22_22_12

Not on your lists

comp(9295..9585)
DNA (291bp) protein (97aa)
hypothetical protein
Gp49 (db=HMMPfam db_id=PF05973 from=18 to=93 evalue=1.4e-14 interpro_id=IPR009241 interpro_description=Protein of unknown function DUF891)
hypothetical protein alias=ACD22_C00022G00012,ACD22_31475.22341.19G0012,ACD22_31475.22341.19_12 id=22738 tax=ACD22 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=WWE3 organism_desc=WWE3
Uncharacterized protein {ECO:0000313|EMBL:EKE00015.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_13

Not on your lists

9622..9726
DNA (105bp) protein (35aa)
9622..9726 + (rbs_motif=TATA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE00016.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_14

Not on your lists

9767..10228
DNA (462bp) protein (154aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
Uncharacterized protein {ECO:0000313|EMBL:EKE00017.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_15

Not on your lists

comp(10245..10814)
DNA (570bp) protein (190aa)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=55 to=185 evalue=1.6e-08)
Uncharacterized protein {ECO:0000313|EMBL:EKE00018.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_16

Not on your lists

comp(10883..12664)
DNA (1782bp) protein (594aa)
VanW family protein
VanW family protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=D3PMB3_MEIRD (db=UNIREF evalue=8.0e-65 bit_score=252.0 identity=30.6 coverage=95.1178451178451)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
seg (db=Seg db_id=seg from=3 to=19)
ACD22_22_17

Not on your lists

comp(12683..13234)
DNA (552bp) protein (184aa)
hypothetical protein
DUF88 (db=HMMPfam db_id=PF01936 from=10 to=157 evalue=8.8e-32)
hypothetical protein alias=ACD22_C00022G00017,ACD22_31475.22341.19G0017,ACD22_31475.22341.19_17 id=22741 tax=ACD22 species=Natronomonas pharaonis genus=Natronomonas taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_group=WWE3 organism_desc=WWE3
Uncharacterized protein {ECO:0000313|EMBL:EKE00020.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_18

Not on your lists

13261..13488
DNA (228bp) protein (76aa)
13261..13488 + (rbs_motif=TATA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE00021.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_19

Not on your lists

comp(13424..16153)
DNA (2730bp) protein (910aa)
13424..16153 - (rbs_motif=ATAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE00022.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_20

Not on your lists

16544..16771
DNA (228bp) protein (76aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
seg (db=Seg db_id=seg from=23 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
TspO_MBR (db=HMMPfam db_id=PF03073 from=2 to=71 evalue=1.2e-11 interpro_id=IPR004307 interpro_description=TspO/MBR-related protein GO=Cellular Component: integral to membrane (GO:0016021))
ACD22_22_21

Not on your lists

16773..17930
DNA (1158bp) protein (386aa)
putative deoxyribonuclease
seg (db=Seg db_id=seg from=110 to=121)
seg (db=Seg db_id=seg from=215 to=228)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=128 to=384 evalue=6.2e-29)
ACD22_22_22

Not on your lists

17960..18625
DNA (666bp) protein (222aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE00025.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein; K06950 alias=ACD22_C00022G00022,ACD22_31475.22341.19G0022,ACD22_31475.22341.19_22 id=22749 tax=ACD22 species=Actinosynnema mirum genus=Actinosynnema taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=WWE3 organism_desc=WWE3
ACD22_22_23

Not on your lists

comp(19893..20027)
DNA (135bp) protein (45aa)
19893..20027 - (rbs_motif=ATA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE00026.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_22_24
R_OP11_Gottesmanbacteria_49_10, Gottesmanbacteria, Microgenomates, Bacteria

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20830..21375
DNA (546bp) protein (182aa)
tRNA-dihydrouridine synthase
seg (db=Seg db_id=seg from=143 to=149)
UPF0034 (db=PatternScan db_id=PS01136 from=80 to=98 evalue=0.0 interpro_id=IPR018517 interpro_description=tRNA-dihydrouridine synthase, conserved site GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA dihydrouridine synthase activity (GO:0017150), Molecular Function: FAD binding (GO:0050660), Biological Process: oxidation reduction (GO:0055114))
TRNA-DIHYDROURIDINE SYNTHASE-RELATED (db=HMMPanther db_id=PTHR11082:SF7 from=24 to=142 evalue=4.0e-45)
ACD22_22_25

Not on your lists

21389..21778
DNA (390bp) protein (130aa)
dihydrouridine synthase dus
seg (db=Seg db_id=seg from=89 to=100)
TRNA-DIHYDROURIDINE SYNTHASE-RELATED (db=HMMPanther db_id=PTHR11082:SF7 from=1 to=113 evalue=1.4e-26)
TRNA-DIHYDROURIDINE SYNTHASE (db=HMMPanther db_id=PTHR11082 from=1 to=113 evalue=1.4e-26 interpro_id=IPR001269 interpro_description=tRNA-dihydrouridine synthase GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA dihydrouridine synthase activity (GO:0017150), Molecular Function: FAD binding (GO:0050660), Biological Process: oxidation reduction (GO:0055114))
ACD22_22_26

Not on your lists

21783..22379
DNA (597bp) protein (199aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=24 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKE00006.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 26 items

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