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ACD22_46

Alias: ACD22_62.3889.17

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_46_1

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1..1008
DNA (1008bp) protein (336aa)
hypothetical protein
hypothetical protein
ATP synthase subunit beta n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=ATPB_CAMHC (db=UNIREF evalue=2.0e-80 bit_score=302.0 identity=49.55 coverage=97.3214285714286)
seg (db=Seg db_id=seg from=17 to=35)
ACD22_46_2

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995..1279
DNA (285bp) protein (95aa)
ATP-synt_DE_N (db=HMMPfam db_id=PF02823 from=17 to=90 evalue=1.5e-08 interpro_id=IPR020546 interpro_description=ATPase, F1 complex, delta/epsilon subunit, N-terminal GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, rotational me
Q5LD88_BACFN_Q5LD88; (db=BlastProDom db_id=PD000944 from=26 to=56 evalue=0.002 interpro_id=IPR020546 interpro_description=ATPase, F1 complex, delta/epsilon subunit, N-terminal GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, rot
Uncharacterized protein {ECO:0000313|EMBL:EKD99649.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD22_46_3

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comp(1288..1971)
DNA (684bp) protein (228aa)
rplA; 50S ribosomal protein L1
seg (db=Seg db_id=seg from=71 to=84)
Ribosomal protein, L1p/L1a/L10e/organellar L1 types (db=HMMPIR db_id=PIRSF002155 from=1 to=226 evalue=5.0e-62 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
rplA_bact: ribosomal protein L1 (db=HMMTigr db_id=TIGR01169 from=3 to=227 evalue=2.8e-60 interpro_id=IPR005878 interpro_description=Ribosomal protein L1, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
ACD22_46_4

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comp(1974..2408)
DNA (435bp) protein (145aa)
hypothetical protein
seg (db=Seg db_id=seg from=2 to=13)
RIBOSOMAL_L11 (db=PatternScan db_id=PS00359 from=129 to=144 evalue=0.0 interpro_id=IPR020785 interpro_description=Ribosomal protein L11, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L11_bact: ribosomal protein L11 (db=HMMTigr db_id=TIGR01632 from=6 to=144 evalue=1.3e-87 interpro_id=IPR006519 interpro_description=Ribosomal protein L11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD22_46_5

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comp(2443..3051)
DNA (609bp) protein (203aa)
hypothetical protein
seg (db=Seg db_id=seg from=5 to=18)
seg (db=Seg db_id=seg from=107 to=132)
NUSG (db=PatternScan db_id=PS01014 from=185 to=194 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site)
ACD22_46_6

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comp(3069..3248)
DNA (180bp) protein (60aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
SecE (db=HMMPfam db_id=PF00584 from=4 to=58 evalue=1.4e-16 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
secE_bact: preprotein translocase, SecE sub (db=HMMTigr db_id=TIGR00964 from=4 to=59 evalue=7.1e-10 interpro_id=IPR005807 interpro_description=SecE subunit of protein translocation complex GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_46_7

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3312..3926
DNA (615bp) protein (205aa)
peptidase M50
hypothetical protein Bcoam_20619 n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018514A1 (db=UNIREF evalue=1.0e-35 bit_score=152.0 identity=43.9 coverage=79.5121951219512)
transmembrane_regions (db=TMHMM db_id=tmhmm from=177 to=199)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=141)
Displaying 7 items

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